Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0528
         (759 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IKZ3 Cluster: Putative uncharacterized protein; n=1; ...    35   2.5  
UniRef50_A0BUJ3 Cluster: Chromosome undetermined scaffold_13, wh...    34   4.4  
UniRef50_Q22AV6 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_Q23I82 Cluster: Putative uncharacterized protein; n=1; ...    33   7.7  

>UniRef50_Q8IKZ3 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 803

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 25/87 (28%), Positives = 41/87 (47%)
 Frame = -3

Query: 706 IKCIIDSNIAILEKK*AHVLFKT*NNKYPNLILIGSQEAKMSFINIGAHTLSLPTAFLSV 527
           + C+I  ++ + +KK  H+LFK       N+I   +      F NI  H   LP+ FLS 
Sbjct: 475 LNCLIFLSLVVKKKKYHHILFKPFPYVIYNIIHKFNNFLLHIFYNISLHDFELPSHFLS- 533

Query: 526 LATFAKDTSRSFPDAIITLGAFNTKFI 446
            A +     ++  + +I L  +N K I
Sbjct: 534 -AYYKGGNKKNDTENLILLILYNKKEI 559


>UniRef50_A0BUJ3 Cluster: Chromosome undetermined scaffold_13, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_13,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 434

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 23/82 (28%), Positives = 40/82 (48%)
 Frame = -2

Query: 554 VITNRLSIGACDICKGHFKIIS*RNNYVRCL*YKIYRFLVETTVNETVKRQLVALTFIIE 375
           VI N++     + C   FK I+  +N  + +   + +FL +T   ET+K  L  L   + 
Sbjct: 43  VILNKIQ--KFEYCDELFKQIADMDNPPKII-KDLVQFLSQTQSLETIKEGLRCLNNQLY 99

Query: 374 YMDDVSKSENHVFIAIAGSFKH 309
           Y DD    EN +F+ +   F++
Sbjct: 100 YFDDFDNQENEIFLLLQKYFQN 121


>UniRef50_Q22AV6 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2023

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 438 KKSINFVLKAPNVIIASGNDLEVSFANVASTDRKAVGNDNVC 563
           KK++N+ L  P   I SGN L +   N   T+   +  DN C
Sbjct: 263 KKNLNYSLIQPQSTILSGNSLSMQKVNTLPTEMSDISYDNKC 304


>UniRef50_Q23I82 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 603

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
 Frame = +3

Query: 333 NKNMIFRFRNVIHILDNKS*SD*LSFDCFIDGCFNKKSINFVL------KAPNVIIASGN 494
           NKN  F+F N+     N + S  +  + F+ G   K+ INF        K P  I     
Sbjct: 310 NKNYTFQFENIQQTQLNSNYSGVIQIENFMSGDNYKRKINFSKDLLRQNKYPTRIQKELM 369

Query: 495 DLEVSFANVASTDRKAVGNDNV 560
           +L+++  +++ST+ + +G+  V
Sbjct: 370 ELQINIESISSTNTQLIGDKQV 391


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,740,072
Number of Sequences: 1657284
Number of extensions: 12950547
Number of successful extensions: 28166
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28164
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)