Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0528
         (759 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.66 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   4.6  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   4.6  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   4.6  

>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
 Frame = -3

Query: 634 NNKYPNLILIGSQEAKMSFINIGAHT--LSLPTAFLSVLATFAKDTSRS---FPDAIITL 470
           N +   L+ +  +E    FIN+ AH    +L T   + + T  + T+R    +  +I+ +
Sbjct: 154 NEETDKLVEVLKEECYKPFINVNAHVAQFTLKTIAETAMGTKLRFTTRKETIYKQSIVDM 213

Query: 469 GAF 461
           G F
Sbjct: 214 GEF 216


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 592 AKMSFINIGAHTLSLPTAFLSVLATFAKDTSRSF 491
           ++M F  +      L TAFLSVL   A D +  F
Sbjct: 73  SRMYFFILHLSIADLITAFLSVLPQLAWDITYRF 106


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 536 SIGACDICKGHFKIIS*RNNYVRC 465
           +I ACD C G FK    RN    C
Sbjct: 51  NIFACDGCAGFFKRSIRRNRQYVC 74


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 536 SIGACDICKGHFKIIS*RNNYVRC 465
           +I ACD C G FK    RN    C
Sbjct: 51  NIFACDGCAGFFKRSIRRNRQYVC 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,772
Number of Sequences: 336
Number of extensions: 3665
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)