Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0528
         (759 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021951-1|AAX51656.1| 1732|Drosophila melanogaster LD01527p pro...    30   3.9  
AE014134-2995|AAF53722.3| 1732|Drosophila melanogaster CG18397-P...    30   3.9  
BT028852-1|ABI34233.2|  392|Drosophila melanogaster RT01127p pro...    29   6.9  
BT028820-1|ABI34201.2|  392|Drosophila melanogaster RT01027p pro...    29   6.9  
AF247709-1|AAF63760.1|  392|Drosophila melanogaster myotonix pro...    29   6.9  
AF099185-1|AAD39864.1|  392|Drosophila melanogaster homeobox pro...    29   6.9  
AE014296-3418|AAN12144.1|  392|Drosophila melanogaster CG3871-PB...    29   6.9  
AE014296-3417|AAF51640.3|  392|Drosophila melanogaster CG3871-PA...    29   6.9  

>BT021951-1|AAX51656.1| 1732|Drosophila melanogaster LD01527p protein.
          Length = 1732

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -2

Query: 452  IYRFLVETTVNETVKRQLVALTFIIEYMDDVSKSE 348
            IY FLV  + N    R+ ++  F + ++D+ SKSE
Sbjct: 1671 IYPFLVTVSFNNPPAREFLSKDFDLTFLDEYSKSE 1705


>AE014134-2995|AAF53722.3| 1732|Drosophila melanogaster CG18397-PA
            protein.
          Length = 1732

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -2

Query: 452  IYRFLVETTVNETVKRQLVALTFIIEYMDDVSKSE 348
            IY FLV  + N    R+ ++  F + ++D+ SKSE
Sbjct: 1671 IYPFLVTVSFNNPPAREFLSKDFDLTFLDEYSKSE 1705


>BT028852-1|ABI34233.2|  392|Drosophila melanogaster RT01127p
           protein.
          Length = 392

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3

Query: 459 LKAPNVIIASGNDLEVSFANVASTDRKAVGNDNVCAPIFIKDIF 590
           L   N+ ++ G DL+ + +   S+D  AV  DN+ +P+    +F
Sbjct: 6   LDGNNLSVSIGGDLDSTSSGGTSSDHSAVHQDNLSSPMAYGSLF 49


>BT028820-1|ABI34201.2|  392|Drosophila melanogaster RT01027p
           protein.
          Length = 392

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3

Query: 459 LKAPNVIIASGNDLEVSFANVASTDRKAVGNDNVCAPIFIKDIF 590
           L   N+ ++ G DL+ + +   S+D  AV  DN+ +P+    +F
Sbjct: 6   LDGNNLSVSIGGDLDSTSSGGTSSDHSAVHQDNLSSPMAYGSLF 49


>AF247709-1|AAF63760.1|  392|Drosophila melanogaster myotonix
           protein.
          Length = 392

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3

Query: 459 LKAPNVIIASGNDLEVSFANVASTDRKAVGNDNVCAPIFIKDIF 590
           L   N+ ++ G DL+ + +   S+D  AV  DN+ +P+    +F
Sbjct: 6   LDGNNLSVSIGGDLDSTSSGGTSSDHSAVHQDNLSSPMAYGSLF 49


>AF099185-1|AAD39864.1|  392|Drosophila melanogaster homeobox
           protein SIX4 protein.
          Length = 392

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3

Query: 459 LKAPNVIIASGNDLEVSFANVASTDRKAVGNDNVCAPIFIKDIF 590
           L   N+ ++ G DL+ + +   S+D  AV  DN+ +P+    +F
Sbjct: 6   LDGNNLSVSIGGDLDSTSSGGTSSDHSAVHQDNLSSPMAYGSLF 49


>AE014296-3418|AAN12144.1|  392|Drosophila melanogaster CG3871-PB,
           isoform B protein.
          Length = 392

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3

Query: 459 LKAPNVIIASGNDLEVSFANVASTDRKAVGNDNVCAPIFIKDIF 590
           L   N+ ++ G DL+ + +   S+D  AV  DN+ +P+    +F
Sbjct: 6   LDGNNLSVSIGGDLDSTSSGGTSSDHSAVHQDNLSSPMAYGSLF 49


>AE014296-3417|AAF51640.3|  392|Drosophila melanogaster CG3871-PA,
           isoform A protein.
          Length = 392

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3

Query: 459 LKAPNVIIASGNDLEVSFANVASTDRKAVGNDNVCAPIFIKDIF 590
           L   N+ ++ G DL+ + +   S+D  AV  DN+ +P+    +F
Sbjct: 6   LDGNNLSVSIGGDLDSTSSGGTSSDHSAVHQDNLSSPMAYGSLF 49


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,163,988
Number of Sequences: 53049
Number of extensions: 599173
Number of successful extensions: 1528
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1528
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)