Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0525
         (318 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   1.8  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   4.1  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   4.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   5.5  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    20   5.5  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    20   5.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    20   7.2  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    20   7.2  
AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine 3-mon...    20   7.2  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    20   7.2  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    20   7.2  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    20   7.2  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    20   7.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   7.2  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    19   9.5  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 21  EEDYVPHEVIRIVEPSY 71
           E+ Y+  EV+R+ +P Y
Sbjct: 337 EKKYILQEVVRVKKPHY 353


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +3

Query: 174 VNRVIWENFYKPI 212
           +N V+++N YKP+
Sbjct: 261 LNSVLFQNVYKPL 273


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +3

Query: 174 VNRVIWENFYKPI 212
           +N V+++N YKP+
Sbjct: 261 LNSVLFQNVYKPL 273


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 74  HVGWLHNSDYFVGHVVFFP 18
           H+ +L   DYF  H++F P
Sbjct: 192 HLLFLLCLDYFTLHLLFLP 210


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 116 ALFSQTNSVFVVHAHVGWLHN 54
           ++F+  N+ F    H G +HN
Sbjct: 60  SVFAANNAEFPEFVHSGMVHN 80


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 116 ALFSQTNSVFVVHAHVGWLHN 54
           ++F+  N+ F    H G +HN
Sbjct: 60  SVFAANNAEFPEFVHSGMVHN 80


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +2

Query: 122 LPNHEHPQ 145
           LP H HPQ
Sbjct: 377 LPTHRHPQ 384


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 158 LVRVVCEPRHMG 193
           LV V C+P H+G
Sbjct: 51  LVSVKCKPYHVG 62


>AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 101

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 158 LVRVVCEPRHMG 193
           LV V C+P H+G
Sbjct: 66  LVSVKCKPYHVG 77


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 158 LVRVVCEPRHMG 193
           LV V C+P H+G
Sbjct: 284 LVSVKCKPYHVG 295


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 158 LVRVVCEPRHMG 193
           LV V C+P H+G
Sbjct: 284 LVSVKCKPYHVG 295


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 317 TSEQRRVWCKLL 282
           T  +R  WCKLL
Sbjct: 79  TITKRNQWCKLL 90


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 317 TSEQRRVWCKLL 282
           T  +R  WCKLL
Sbjct: 79  TITKRNQWCKLL 90


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 317 TSEQRRVWCKLL 282
           T  +R  WCKLL
Sbjct: 399 TITKRNQWCKLL 410


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 311 EQRRVWCKLLYFENE 267
           EQ  +  +L+YF+NE
Sbjct: 314 EQEELIHRLVYFQNE 328


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,742
Number of Sequences: 336
Number of extensions: 1487
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5942776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)