Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0525
         (318 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031630-22|CAA20995.2|  454|Caenorhabditis elegans Hypothetical...    31   0.24 
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr...    28   1.7  
AL110477-5|CAB54329.1|  314|Caenorhabditis elegans Hypothetical ...    27   2.2  
Z97191-2|CAB10025.1|  481|Caenorhabditis elegans Hypothetical pr...    27   3.9  
Z83223-3|CAB05717.2|  385|Caenorhabditis elegans Hypothetical pr...    26   6.8  
Z81497-8|CAC70080.1|  707|Caenorhabditis elegans Hypothetical pr...    26   6.8  
Z75953-7|CAB00101.2|  707|Caenorhabditis elegans Hypothetical pr...    26   6.8  
Z49911-6|CAA90132.1|  831|Caenorhabditis elegans Hypothetical pr...    26   6.8  
U00181-1|AAA18259.1|  707|Caenorhabditis elegans protein kinase ...    26   6.8  
AF025457-9|AAB70969.2|  393|Caenorhabditis elegans Hypothetical ...    26   6.8  
AF078788-1|AAC26965.2|  629|Caenorhabditis elegans Hypothetical ...    25   8.9  
AB259784-1|BAF48662.1|  323|Caenorhabditis elegans ROG-1 protein.      25   8.9  

>AL031630-22|CAA20995.2|  454|Caenorhabditis elegans Hypothetical
           protein Y38H6C.17 protein.
          Length = 454

 Score = 30.7 bits (66), Expect = 0.24
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 160 ELVYSLWMFMIGQPPPFLARLILYSLFMP 74
           E +  +W F+ G PPPF   +++   F+P
Sbjct: 151 EHIIEIWQFIAGSPPPFSKIVLILMYFVP 179


>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical
           protein F37A4.4 protein.
          Length = 1163

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -3

Query: 178 FTNDSNELVYSLWMFMIGQPPPFLARLILYSLFMPT*DGSTILITS 41
           FT++      +L+++  G+   +  R   YSLFM   DG  +LI S
Sbjct: 787 FTSNGRNQYINLYLYYFGKTSDYEKRW-RYSLFMDRVDGKNVLIDS 831


>AL110477-5|CAB54329.1|  314|Caenorhabditis elegans Hypothetical
           protein Y113G7B.7 protein.
          Length = 314

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +3

Query: 24  EDYVPHEVIRIVEPSYVGMNN 86
           +D +  EV+R+ +PSY+G +N
Sbjct: 268 DDEIEPEVVRLFDPSYIGNDN 288


>Z97191-2|CAB10025.1|  481|Caenorhabditis elegans Hypothetical
           protein H32K16.1 protein.
          Length = 481

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 160 ELVYSLWMFMIGQPPPFLARLILYSLFMP 74
           E V  +W F    PPPF   +++   F+P
Sbjct: 179 EHVIEIWEFFADSPPPFSKCVMILMYFVP 207


>Z83223-3|CAB05717.2|  385|Caenorhabditis elegans Hypothetical
           protein E01G4.5 protein.
          Length = 385

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = +3

Query: 84  NEYRISLAKKGGGCPIMNIHSEYTNSFESFVNRVIWENFYKPIVYI 221
           +EY+I L    G  P+  I +EY      F+    ++  Y+ + +I
Sbjct: 232 HEYQIKLWTCNGRQPVAYIDAEYNPEGTKFIGLFFYDGHYEVVDHI 277


>Z81497-8|CAC70080.1|  707|Caenorhabditis elegans Hypothetical
           protein F57F5.5 protein.
          Length = 707

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = -2

Query: 215 NDGFVEVLPYDAVHKRLERVGVLAVDVHDWAAAALFSQTNSVF 87
           ND +V++ P+  +H  +E  G    DVH      +F +  + F
Sbjct: 110 NDIWVDLEPHGQLHVVVEMHGTNVEDVHSHNKTRVFKERTNAF 152


>Z75953-7|CAB00101.2|  707|Caenorhabditis elegans Hypothetical
           protein F57F5.5 protein.
          Length = 707

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = -2

Query: 215 NDGFVEVLPYDAVHKRLERVGVLAVDVHDWAAAALFSQTNSVF 87
           ND +V++ P+  +H  +E  G    DVH      +F +  + F
Sbjct: 110 NDIWVDLEPHGQLHVVVEMHGTNVEDVHSHNKTRVFKERTNAF 152


>Z49911-6|CAA90132.1|  831|Caenorhabditis elegans Hypothetical
           protein M28.8 protein.
          Length = 831

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +1

Query: 13  LGGKKTTC-PTK*SELWSHPTWA*TTNTE 96
           LGGKK    PT+  ELW+ P  + T+NTE
Sbjct: 721 LGGKKDQVRPTE--ELWATPILSSTSNTE 747


>U00181-1|AAA18259.1|  707|Caenorhabditis elegans protein kinase C
           protein.
          Length = 707

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = -2

Query: 215 NDGFVEVLPYDAVHKRLERVGVLAVDVHDWAAAALFSQTNSVF 87
           ND +V++ P+  +H  +E  G    DVH      +F +  + F
Sbjct: 110 NDIWVDLEPHGQLHVVVEMHGTNVEDVHSHNKTRVFKERTNAF 152


>AF025457-9|AAB70969.2|  393|Caenorhabditis elegans Hypothetical
           protein C08E3.10 protein.
          Length = 393

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +3

Query: 81  NNEYRISLAKKGGGCPIMNIHSEYTNSFESFVNRVIWENFYKPIVYIGTD 230
           N+ + I+   KGGGC ++   S Y N  + F+      +  K I   G D
Sbjct: 133 NDRFIITYEPKGGGCTVIYFDS-YVNEDDYFLEEYDERSNKKEIFVPGKD 181


>AF078788-1|AAC26965.2|  629|Caenorhabditis elegans Hypothetical
           protein ZC190.4 protein.
          Length = 629

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 41  RSNQNCGAILRGHEQRIQN 97
           R+N+  G  L GH+Q IQN
Sbjct: 140 RNNRGNGGHLNGHQQNIQN 158


>AB259784-1|BAF48662.1|  323|Caenorhabditis elegans ROG-1 protein.
          Length = 323

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +3

Query: 33  VPHEVIRIVEPSYVGMNNEYRISLAKKGGGCPIMNIHSEYTNSFESFVNRV 185
           +P  V R     + GMN+E   S     G    +  HS + +SF+    R+
Sbjct: 205 MPSSVQRFRSEVFAGMNSEVLTSSMNSSGFNDSIGYHSYHRSSFDPRSGRI 255


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,484,306
Number of Sequences: 27780
Number of extensions: 140752
Number of successful extensions: 326
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 326
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)