Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0525
(318 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g38670.1 68415.m04749 ethanolamine-phosphate cytidylyltransfe... 27 2.1
At1g49340.2 68414.m05531 phosphatidylinositol 3- and 4-kinase fa... 27 2.1
At1g49340.1 68414.m05530 phosphatidylinositol 3- and 4-kinase fa... 27 2.1
At2g46570.1 68415.m05809 laccase family protein / diphenol oxida... 27 3.6
At2g02090.1 68415.m00145 SNF2 domain-containing protein / helica... 27 3.6
At3g54400.1 68416.m06015 aspartyl protease family protein contai... 26 4.8
At5g37390.1 68418.m04498 hypothetical protein contains Pfam prof... 26 6.3
At5g33220.1 68418.m03924 hypothetical protein contains Pfam prof... 26 6.3
At4g28960.1 68417.m04137 hypothetical protein contains Pfam prof... 26 6.3
At3g47330.1 68416.m05144 hypothetical protein contains Pfam prof... 26 6.3
At1g23930.1 68414.m03019 hypothetical protein contains Pfam prof... 26 6.3
At5g65640.1 68418.m08257 basic helix-loop-helix (bHLH) family pr... 25 8.3
At1g71060.1 68414.m08201 pentatricopeptide (PPR) repeat-containi... 25 8.3
>At2g38670.1 68415.m04749 ethanolamine-phosphate
cytidylyltransferase, putative / phosphorylethanolamine
transferase, putative / CTP:phosphoethanolamine
cytidylyltransferase, putative similar to SP|Q99447
Ethanolamine-phosphate cytidylyltransferase (EC
2.7.7.14) {Homo sapiens}; contains Pfam profile PF01467:
Cytidylyltransferase
Length = 421
Score = 27.5 bits (58), Expect = 2.1
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 72 VGMNNEYRISLAKKGGGCPIMNIH 143
VG++N+ +S AK+G PIMN+H
Sbjct: 286 VGIHNDQTVS-AKRGAHRPIMNLH 308
>At1g49340.2 68414.m05531 phosphatidylinositol 3- and 4-kinase family
protein contains similarity to phosphatidylinositol
4-kinase 230 GI:2326227 from [Homo sapiens], from [Bos
taurus] GI:2198791; contains Pfam profiles PF00454:
Phosphatidylinositol 3- and 4-kinase, PF00613:
Phosphoinositide 3-kinase family, accessory domain
Length = 2028
Score = 27.5 bits (58), Expect = 2.1
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = -2
Query: 200 EVLPYDAVHKRLERVGVLAVDVHDWAAAALFSQTNSVFVVHAHVGWLHNSDYFVGHVVFF 21
E LPY K +E VL + WAA ++ F+ A+ G Y + + +
Sbjct: 1530 EALPYFVTPKNVEENSVLLQQLPHWAACSITQALE--FLTPAYKGHPRVMAYVLRVLESY 1587
Query: 20 PPKSV 6
PP+ V
Sbjct: 1588 PPERV 1592
>At1g49340.1 68414.m05530 phosphatidylinositol 3- and 4-kinase family
protein contains similarity to phosphatidylinositol
4-kinase 230 GI:2326227 from [Homo sapiens], from [Bos
taurus] GI:2198791; contains Pfam profiles PF00454:
Phosphatidylinositol 3- and 4-kinase, PF00613:
Phosphoinositide 3-kinase family, accessory domain
Length = 2028
Score = 27.5 bits (58), Expect = 2.1
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = -2
Query: 200 EVLPYDAVHKRLERVGVLAVDVHDWAAAALFSQTNSVFVVHAHVGWLHNSDYFVGHVVFF 21
E LPY K +E VL + WAA ++ F+ A+ G Y + + +
Sbjct: 1530 EALPYFVTPKNVEENSVLLQQLPHWAACSITQALE--FLTPAYKGHPRVMAYVLRVLESY 1587
Query: 20 PPKSV 6
PP+ V
Sbjct: 1588 PPERV 1592
>At2g46570.1 68415.m05809 laccase family protein / diphenol oxidase
family protein similar to laccase [Populus balsamifera
subsp. trichocarpa][GI:3805960]
Length = 569
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 107 SQTNSVFVVHAHVGWLHNSDYFVGHVVFFPPKSV 6
+Q F+ HAH WL + Y G ++ +P SV
Sbjct: 123 AQQKGTFLWHAHFSWLRATVY--GPLIVYPKASV 154
>At2g02090.1 68415.m00145 SNF2 domain-containing protein / helicase
domain-containing protein similar to transcriptional
activator SRCAP [Homo sapiens] GI:5106572; contains Pfam
profiles PF00271: Helicase conserved C-terminal domain,
PF00176: SNF2 family N-terminal domain
Length = 763
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 127 GQPPPFLARLILYSLF 80
G+PPPF L+ YSLF
Sbjct: 313 GKPPPFNVLLVCYSLF 328
>At3g54400.1 68416.m06015 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 425
Score = 26.2 bits (55), Expect = 4.8
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 51 RIVEPSYVGMNNEYR 95
R+VEP+YV + NE+R
Sbjct: 313 RLVEPAYVAVRNEFR 327
>At5g37390.1 68418.m04498 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 628
Score = 25.8 bits (54), Expect = 6.3
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -3
Query: 199 KFSHMTRFTNDSNELVYSLWMFMIGQPPPFLAR 101
+F H+ + N ++ +WM M+ LAR
Sbjct: 189 QFKHIFHMPKEPNHMIQGMWMLMVRTAKTELAR 221
>At5g33220.1 68418.m03924 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 587
Score = 25.8 bits (54), Expect = 6.3
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -3
Query: 199 KFSHMTRFTNDSNELVYSLWMFMIGQPPPFLAR 101
+F H+ + N ++ +WM M+ LAR
Sbjct: 235 QFKHIFHMPKEPNHMIQGMWMLMVRTAKTELAR 267
>At4g28960.1 68417.m04137 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 493
Score = 25.8 bits (54), Expect = 6.3
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -3
Query: 199 KFSHMTRFTNDSNELVYSLWMFMIGQPPPFLAR 101
+F H+ + N ++ +WM M+ LAR
Sbjct: 157 QFKHIFHMPKEPNHMIQGMWMLMVRTAKTELAR 189
>At3g47330.1 68416.m05144 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 664
Score = 25.8 bits (54), Expect = 6.3
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -3
Query: 199 KFSHMTRFTNDSNELVYSLWMFMIGQPPPFLAR 101
+F H+ + N ++ +WM M+ LAR
Sbjct: 189 QFKHIFHMPKEPNHMIQGMWMLMVRTAKTELAR 221
>At1g23930.1 68414.m03019 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 649
Score = 25.8 bits (54), Expect = 6.3
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -3
Query: 199 KFSHMTRFTNDSNELVYSLWMFMIGQPPPFLAR 101
+F H+ + N ++ +WM M+ LAR
Sbjct: 170 QFKHIFHMPKEPNHMIQGMWMLMVRTAKTELAR 202
>At5g65640.1 68418.m08257 basic helix-loop-helix (bHLH) family
protein
Length = 351
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = -3
Query: 169 DSNELVY-SLWMFMIGQPPPFL 107
D N L+Y S +M +I QPPP L
Sbjct: 60 DENTLLYPSSFMDLISQPPPLL 81
>At1g71060.1 68414.m08201 pentatricopeptide (PPR) repeat-containing
protein low similarity to CRP1 [Zea mays] GI:3289002;
contains Pfam profile PF01535: PPR repeat
Length = 510
Score = 25.4 bits (53), Expect = 8.3
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 218 VNDGFVEVLP--YDAVHKRLERVGVLAVDVHDWA 123
+N+ V++ P + V K+L GVLA+ V WA
Sbjct: 85 LNEASVKLSPALIEEVLKKLSNAGVLALSVFKWA 118
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,096,728
Number of Sequences: 28952
Number of extensions: 132767
Number of successful extensions: 348
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 340508912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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