Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0524
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   0.98 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   1.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.1  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   9.1  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   9.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   9.1  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 414 TKAYCYFYYS 443
           TK YCY+YY+
Sbjct: 110 TKRYCYYYYA 119


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 380 AFCIRPLTQQDNESLLLFLLFTIGQALNILLGC 478
           A C+  +T  +NE    ++ +TIG  + I +GC
Sbjct: 24  AICVPKITSTNNEVPRWYICYTIG--VIITIGC 54


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 545 MVKIRILYLNRNLQTVLE 492
           M+KIR + LN+ +  ++E
Sbjct: 463 MLKIRFVILNKQINNLIE 480


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 426 CYFYYSQ*DKLSISY 470
           CYF YS+ D  S+S+
Sbjct: 2   CYFNYSKKDIRSLSF 16


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 545 MVKIRILYLNRNLQTVLE 492
           M+KIR + LN+ +  ++E
Sbjct: 188 MLKIRFVILNKQINNLIE 205


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 426 CYFYYSQ*DKLSISY 470
           CYF YS+ D  S+S+
Sbjct: 2   CYFNYSKKDIRSLSF 16


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,392
Number of Sequences: 336
Number of extensions: 2521
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)