Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0523
         (648 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2XF06 Cluster: Putative uncharacterized protein; n=1; ...    36   1.1  
UniRef50_Q4DKU0 Cluster: DNA polymerase zeta catalytic subunit, ...    34   2.6  

>UniRef50_A2XF06 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (indica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. indica
           (Rice)
          Length = 676

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
 Frame = -3

Query: 196 ERSRDEHAPVTYPTNPPA---ILYTALLGFPITRPNRDTCV--TKYLVSIQFEDISVQGL 32
           +++++   PVT P  PP    +   + LG P+TRP  DTC   T Y +  +  + S   +
Sbjct: 93  KKTKEREDPVTRPPTPPPRPPLAKMSQLGDPVTRPEEDTCFIPTSYAIDEELREWSETSV 152

Query: 31  I 29
           +
Sbjct: 153 V 153


>UniRef50_Q4DKU0 Cluster: DNA polymerase zeta catalytic subunit,
           putative; n=1; Trypanosoma cruzi|Rep: DNA polymerase
           zeta catalytic subunit, putative - Trypanosoma cruzi
          Length = 1885

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
 Frame = -1

Query: 357 QSPRKRKKKTNENSQRFF-----NYFEICVFVNTLTFFFSVSHKRKRLIVLVWSSWLRRN 193
           ++PR  K++T E    FF     N+F    F+ +L F      +R+R    V +     N
Sbjct: 15  KNPRDNKQQTEEGGTEFFFTPITNFF---FFIFSLLFSVGRRRRRRRRSECVGNCGPYMN 71

Query: 192 DHVTNTRPSLTQPTPL 145
            HV +   SLT+P PL
Sbjct: 72  LHVVSVEHSLTKPDPL 87


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,359,489
Number of Sequences: 1657284
Number of extensions: 11069825
Number of successful extensions: 26216
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26167
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)