Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0520
         (779 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    29   0.055
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.3  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   6.3  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   6.3  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   6.3  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 28.7 bits (61), Expect = 0.055
 Identities = 14/57 (24%), Positives = 24/57 (42%)
 Frame = +3

Query: 306 LICLLACLIMKYSVQLNNTTIKIFVLWVVRFTSCAFND*TLHQLCCLNIKALQRHAV 476
           +I L     + + +  NNTT +    W+V +T    +   L Q C   +   Q+  V
Sbjct: 141 VILLWISFFLNFMLHCNNTTWRCLYRWIVLYTLSKMSQVMLIQFCAFVVVLKQKFCV 197


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 159 PTYFSFPSRIVDIGFMGKWWNLFIKSTNY 245
           PT +  P  ++ I  +G WW  F+  T+Y
Sbjct: 8   PTLYLIPVSVILIS-VG-WWENFVSETSY 34


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 159 PTYFSFPSRIVDIGFMGKWWNLFIKSTNY 245
           PT +  P  ++ I  +G WW  F+  T+Y
Sbjct: 241 PTLYLIPVSVILIS-VG-WWENFVSETSY 267


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 159 PTYFSFPSRIVDIGFMGKWWNLFIKSTNY 245
           PT +  P  ++ I  +G WW  F+  T+Y
Sbjct: 241 PTLYLIPVSVILIS-VG-WWENFVSETSY 267


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = -2

Query: 613 INYYFLFCNEKVMII*MFFVKLMWLSKQAKGMFVISMVILIHILQITACLCKALIFKQH 437
           ++  FL C     ++ +FF+  ++    A   F+I  V L+ +L I    C  +IF  H
Sbjct: 125 VHLLFLLCIY-YFVVPLFFLLCIYYFYCA---FIIFTVHLLFLLCIYHFFCAFIIFTMH 179


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -2

Query: 202 NPISTIREGKL 170
           NPI TI EGKL
Sbjct: 3   NPIVTIEEGKL 13


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -2

Query: 202 NPISTIREGKL 170
           NPI TI EGKL
Sbjct: 1   NPIVTIEEGKL 11


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -2

Query: 202 NPISTIREGKL 170
           NPI TI EGKL
Sbjct: 3   NPIVTIEEGKL 13


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,408
Number of Sequences: 336
Number of extensions: 4539
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)