Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0520
         (779 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011833-1|AAH11833.1|  260|Homo sapiens chromosome 19 open read...    62   2e-09
BC007244-1|AAH07244.2|  260|Homo sapiens chromosome 19 open read...    62   2e-09
BC005075-1|AAH05075.2|  260|Homo sapiens chromosome 19 open read...    62   2e-09
CR541757-1|CAG46557.1|  347|Homo sapiens SCAMP3 protein.               30   8.1  
BC010505-1|AAH10505.1|  321|Homo sapiens secretory carrier membr...    30   8.1  
BC005135-1|AAH05135.1|  347|Homo sapiens secretory carrier membr...    30   8.1  
BC000161-1|AAH00161.1|  347|Homo sapiens secretory carrier membr...    30   8.1  
AL713999-27|CAI95095.1|  347|Homo sapiens secretory carrier memb...    30   8.1  
AL713999-26|CAI95096.1|  321|Homo sapiens secretory carrier memb...    30   8.1  
AF023268-2|AAC51821.1|  347|Homo sapiens propin1 protein.              30   8.1  
AF005039-1|AAB62724.1|  347|Homo sapiens secretory carrier membr...    30   8.1  

>BC011833-1|AAH11833.1|  260|Homo sapiens chromosome 19 open reading
           frame 52 protein.
          Length = 260

 Score = 62.5 bits (145), Expect = 2e-09
 Identities = 23/64 (35%), Positives = 39/64 (60%)
 Frame = +3

Query: 63  IHYRSLGILSVMYTSELSNSCDLYRAHCTYTKPTYFSFPSRIVDIGFMGKWWNLFIKSTN 242
           + Y +LG+ S++Y +       LY+A C Y +P +  FP R++D+GF+G+WW L     +
Sbjct: 122 LRYVNLGLCSLVYEAPFDAQASLYQARCRYLQPRWTDFPGRVLDVGFVGRWWVLGAWMRD 181

Query: 243 YDVN 254
            D+N
Sbjct: 182 CDIN 185


>BC007244-1|AAH07244.2|  260|Homo sapiens chromosome 19 open reading
           frame 52 protein.
          Length = 260

 Score = 62.5 bits (145), Expect = 2e-09
 Identities = 23/64 (35%), Positives = 39/64 (60%)
 Frame = +3

Query: 63  IHYRSLGILSVMYTSELSNSCDLYRAHCTYTKPTYFSFPSRIVDIGFMGKWWNLFIKSTN 242
           + Y +LG+ S++Y +       LY+A C Y +P +  FP R++D+GF+G+WW L     +
Sbjct: 122 LRYVNLGLCSLVYEAPFDAQASLYQARCRYLQPRWTDFPGRVLDVGFVGRWWVLGAWMRD 181

Query: 243 YDVN 254
            D+N
Sbjct: 182 CDIN 185


>BC005075-1|AAH05075.2|  260|Homo sapiens chromosome 19 open reading
           frame 52 protein.
          Length = 260

 Score = 62.5 bits (145), Expect = 2e-09
 Identities = 23/64 (35%), Positives = 39/64 (60%)
 Frame = +3

Query: 63  IHYRSLGILSVMYTSELSNSCDLYRAHCTYTKPTYFSFPSRIVDIGFMGKWWNLFIKSTN 242
           + Y +LG+ S++Y +       LY+A C Y +P +  FP R++D+GF+G+WW L     +
Sbjct: 122 LRYVNLGLCSLVYEAPFDAQASLYQARCRYLQPRWTDFPGRVLDVGFVGRWWVLGAWMRD 181

Query: 243 YDVN 254
            D+N
Sbjct: 182 CDIN 185


>CR541757-1|CAG46557.1|  347|Homo sapiens SCAMP3 protein.
          Length = 347

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 261 MEVLWFDLVLIIM*KLICLLACLIMKYSVQLNNTT-IKIFVLWVVRFTSCAF 413
           M  LW    L +   L+  LACL   + V+ NN     + +LWV+ FT C+F
Sbjct: 167 MYYLWMCSTLAL---LLNFLACLA-SFCVETNNGAGFGLSILWVLLFTPCSF 214


>BC010505-1|AAH10505.1|  321|Homo sapiens secretory carrier membrane
           protein 3 protein.
          Length = 321

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 261 MEVLWFDLVLIIM*KLICLLACLIMKYSVQLNNTT-IKIFVLWVVRFTSCAF 413
           M  LW    L +   L+  LACL   + V+ NN     + +LWV+ FT C+F
Sbjct: 141 MYYLWMCSTLAL---LLNFLACLA-SFCVETNNGAGFGLSILWVLLFTPCSF 188


>BC005135-1|AAH05135.1|  347|Homo sapiens secretory carrier membrane
           protein 3 protein.
          Length = 347

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 261 MEVLWFDLVLIIM*KLICLLACLIMKYSVQLNNTT-IKIFVLWVVRFTSCAF 413
           M  LW    L +   L+  LACL   + V+ NN     + +LWV+ FT C+F
Sbjct: 167 MYYLWMCSTLAL---LLNFLACLA-SFCVETNNGAGFGLSILWVLLFTPCSF 214


>BC000161-1|AAH00161.1|  347|Homo sapiens secretory carrier membrane
           protein 3 protein.
          Length = 347

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 261 MEVLWFDLVLIIM*KLICLLACLIMKYSVQLNNTT-IKIFVLWVVRFTSCAF 413
           M  LW    L +   L+  LACL   + V+ NN     + +LWV+ FT C+F
Sbjct: 167 MYYLWMCSTLAL---LLNFLACLA-SFCVETNNGAGFGLSILWVLLFTPCSF 214


>AL713999-27|CAI95095.1|  347|Homo sapiens secretory carrier
           membrane protein 3 protein.
          Length = 347

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 261 MEVLWFDLVLIIM*KLICLLACLIMKYSVQLNNTT-IKIFVLWVVRFTSCAF 413
           M  LW    L +   L+  LACL   + V+ NN     + +LWV+ FT C+F
Sbjct: 167 MYYLWMCSTLAL---LLNFLACLA-SFCVETNNGAGFGLSILWVLLFTPCSF 214


>AL713999-26|CAI95096.1|  321|Homo sapiens secretory carrier
           membrane protein 3 protein.
          Length = 321

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 261 MEVLWFDLVLIIM*KLICLLACLIMKYSVQLNNTT-IKIFVLWVVRFTSCAF 413
           M  LW    L +   L+  LACL   + V+ NN     + +LWV+ FT C+F
Sbjct: 141 MYYLWMCSTLAL---LLNFLACLA-SFCVETNNGAGFGLSILWVLLFTPCSF 188


>AF023268-2|AAC51821.1|  347|Homo sapiens propin1 protein.
          Length = 347

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 261 MEVLWFDLVLIIM*KLICLLACLIMKYSVQLNNTT-IKIFVLWVVRFTSCAF 413
           M  LW    L +   L+  LACL   + V+ NN     + +LWV+ FT C+F
Sbjct: 167 MYYLWMCSTLAL---LLNFLACLA-SFCVETNNGAGFGLSILWVLLFTPCSF 214


>AF005039-1|AAB62724.1|  347|Homo sapiens secretory carrier membrane
           protein protein.
          Length = 347

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 261 MEVLWFDLVLIIM*KLICLLACLIMKYSVQLNNTT-IKIFVLWVVRFTSCAF 413
           M  LW    L +   L+  LACL   + V+ NN     + +LWV+ FT C+F
Sbjct: 167 MYYLWMCSTLAL---LLNFLACLA-SFCVETNNGAGFGLSILWVLLFTPCSF 214


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,642,949
Number of Sequences: 237096
Number of extensions: 2164959
Number of successful extensions: 6335
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6333
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)