Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0520
         (779 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089566-1|AAL90304.1|  191|Drosophila melanogaster RE03721p pro...    68   2e-11
AE014298-532|AAF45875.1|  191|Drosophila melanogaster CG14270-PA...    68   2e-11

>AY089566-1|AAL90304.1|  191|Drosophila melanogaster RE03721p
           protein.
          Length = 191

 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 31/84 (36%), Positives = 46/84 (54%)
 Frame = +3

Query: 6   NPKAVEHLRFLDTCYNQEVIHYRSLGILSVMYTSELSNSCDLYRAHCTYTKPTYFSFPSR 185
           NP + ++L  L+   NQ+ +   SLGI ++++          Y A C YT    F+F  R
Sbjct: 107 NPVSADYLLTLERAINQKKLRLLSLGICTILWVDLYDEDDCTYPAICEYTNVGVFNFHER 166

Query: 186 IVDIGFMGKWWNLFIKSTNYDVNY 257
           I+D+GF  ++W L  K  NYDVNY
Sbjct: 167 IIDVGFWNQYWRLKWKMRNYDVNY 190


>AE014298-532|AAF45875.1|  191|Drosophila melanogaster CG14270-PA
           protein.
          Length = 191

 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 31/84 (36%), Positives = 46/84 (54%)
 Frame = +3

Query: 6   NPKAVEHLRFLDTCYNQEVIHYRSLGILSVMYTSELSNSCDLYRAHCTYTKPTYFSFPSR 185
           NP + ++L  L+   NQ+ +   SLGI ++++          Y A C YT    F+F  R
Sbjct: 107 NPVSADYLLTLERAINQKKLRLLSLGICTILWVDLYDEDDCTYPAICEYTNVGVFNFHER 166

Query: 186 IVDIGFMGKWWNLFIKSTNYDVNY 257
           I+D+GF  ++W L  K  NYDVNY
Sbjct: 167 IIDVGFWNQYWRLKWKMRNYDVNY 190


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,018,939
Number of Sequences: 53049
Number of extensions: 685904
Number of successful extensions: 985
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)