Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0518
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   3.5  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   4.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   4.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   4.6  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   6.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   6.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   6.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.1  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -2

Query: 604 QMKVAGCTEEDLTACYRLGSNTNKPRP 524
           Q   A CTE+  TA YR      K  P
Sbjct: 69  QTNCAKCTEKQRTAAYRSIKRLKKEYP 95


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 575 LFCATSHLHLVG*YTHNCCCW 637
           L+  T++LH++     NC  W
Sbjct: 156 LYHTTAYLHIITMINMNCALW 176


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 575 LFCATSHLHLVG*YTHNCCCW 637
           L+  T++LH++     NC  W
Sbjct: 156 LYHTTAYLHIITMINMNCALW 176


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 575 LFCATSHLHLVG*YTHNCCCW 637
           L+  T++LH++     NC  W
Sbjct: 156 LYHTTAYLHIITMINMNCALW 176


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 238 SSGKSHDEPKTAPKSAAEREIGKR 167
           S G  H + +T+P     +E+G R
Sbjct: 151 SPGSGHQDSRTSPSGQHLQELGLR 174


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 238 SSGKSHDEPKTAPKSAAEREIGKR 167
           S G  H + +T+P     +E+G R
Sbjct: 151 SPGSGHQDSRTSPSGQHLQELGLR 174


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 238 SSGKSHDEPKTAPKSAAEREIGKR 167
           S G  H + +T+P     +E+G R
Sbjct: 151 SPGSGHQDSRTSPSGQHLQELGLR 174


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 214 VRHEISQMTEELLALFEPRETW 279
           +RHE+ ++ +    L E  ETW
Sbjct: 608 MRHELQKLAQVYRILGETIETW 629


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 498 LKLRNLTNIGLGLLVLEPNR*QAVKS 575
           LKL+NLT  G GL  +     Q V+S
Sbjct: 614 LKLQNLTLSGKGLKKITGKMFQGVRS 639


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,144
Number of Sequences: 336
Number of extensions: 3909
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)