Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0518
         (758 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC067771-1|AAH67771.1|  314|Homo sapiens CCDC74B protein protein.      31   3.4  
BC063387-1|AAH63387.1|  312|Homo sapiens CCDC74A protein protein.      31   3.4  
BC016861-1|AAH16861.1|  378|Homo sapiens coiled-coil domain cont...    31   3.4  
AK057609-1|BAB71533.1|  380|Homo sapiens protein ( Homo sapiens ...    31   3.4  
AC093838-1|AAY14809.1|  378|Homo sapiens unknown protein.              31   3.4  

>BC067771-1|AAH67771.1|  314|Homo sapiens CCDC74B protein protein.
          Length = 314

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/66 (25%), Positives = 32/66 (48%)
 Frame = -2

Query: 364 TTDGKIIVLLPDNKRSKIEQMFELQHLKTKFPSAQKAQGAPQSSGKSHDEPKTAPKSAAE 185
           TT  +  VL+ +   + + Q  ELQHLK+    +Q+ Q  P+ +    D+  T     + 
Sbjct: 204 TTLRQCEVLIRELWNTNLLQTQELQHLKSLLEGSQRPQAVPEEASFPRDQEATHFPKVST 263

Query: 184 REIGKR 167
           + + K+
Sbjct: 264 KSLSKK 269


>BC063387-1|AAH63387.1|  312|Homo sapiens CCDC74A protein protein.
          Length = 312

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/66 (25%), Positives = 33/66 (50%)
 Frame = -2

Query: 364 TTDGKIIVLLPDNKRSKIEQMFELQHLKTKFPSAQKAQGAPQSSGKSHDEPKTAPKSAAE 185
           TT  +  VL+ +   + + Q  EL+HLK+    +Q+ Q AP+ +    D+  T     + 
Sbjct: 204 TTLRQCEVLIRELWNTNLLQTQELRHLKSLLEGSQRPQAAPEEASFPRDQEATHFPKVST 263

Query: 184 REIGKR 167
           + + K+
Sbjct: 264 KSLSKK 269


>BC016861-1|AAH16861.1|  378|Homo sapiens coiled-coil domain
           containing 74A protein.
          Length = 378

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/66 (25%), Positives = 33/66 (50%)
 Frame = -2

Query: 364 TTDGKIIVLLPDNKRSKIEQMFELQHLKTKFPSAQKAQGAPQSSGKSHDEPKTAPKSAAE 185
           TT  +  VL+ +   + + Q  EL+HLK+    +Q+ Q AP+ +    D+  T     + 
Sbjct: 270 TTLRQCEVLIRELWNTNLLQTQELRHLKSLLEGSQRPQAAPEEASFPRDQEATHFPKVST 329

Query: 184 REIGKR 167
           + + K+
Sbjct: 330 KSLSKK 335


>AK057609-1|BAB71533.1|  380|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33047 fis, clone TRACH1000018. ).
          Length = 380

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/66 (25%), Positives = 32/66 (48%)
 Frame = -2

Query: 364 TTDGKIIVLLPDNKRSKIEQMFELQHLKTKFPSAQKAQGAPQSSGKSHDEPKTAPKSAAE 185
           TT  +  VL+ +   + + Q  ELQHLK+    +Q+ Q  P+ +    D+  T     + 
Sbjct: 270 TTLRQCEVLIRELWNTNLLQTQELQHLKSLLEGSQRPQAVPEEASFPRDQEATHFPKVST 329

Query: 184 REIGKR 167
           + + K+
Sbjct: 330 KSLSKK 335


>AC093838-1|AAY14809.1|  378|Homo sapiens unknown protein.
          Length = 378

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/66 (25%), Positives = 33/66 (50%)
 Frame = -2

Query: 364 TTDGKIIVLLPDNKRSKIEQMFELQHLKTKFPSAQKAQGAPQSSGKSHDEPKTAPKSAAE 185
           TT  +  VL+ +   + + Q  EL+HLK+    +Q+ Q AP+ +    D+  T     + 
Sbjct: 270 TTLRQCEVLIRELWNTNLLQTQELRHLKSLLEGSQRPQAAPEEASFPRDQEATHFPKVST 329

Query: 184 REIGKR 167
           + + K+
Sbjct: 330 KSLSKK 335


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,503,441
Number of Sequences: 237096
Number of extensions: 2501936
Number of successful extensions: 5671
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5668
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)