Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0518
         (758 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025093-1|ABE73264.1|  269|Drosophila melanogaster IP12707p pro...    30   3.9  
AY071422-1|AAL49044.1|  318|Drosophila melanogaster RE50056p pro...    30   3.9  
AE014298-1937|AAF48299.1|  340|Drosophila melanogaster CG11164-P...    30   3.9  
AE014134-1411|AAN11152.1|  455|Drosophila melanogaster CG31900-P...    30   3.9  
AE014134-630|AAF51090.1|  807|Drosophila melanogaster CG15415-PA...    29   6.9  
X04813-1|CAA28502.1| 2236|Drosophila melanogaster protein ( Dros...    29   9.1  

>BT025093-1|ABE73264.1|  269|Drosophila melanogaster IP12707p
           protein.
          Length = 269

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -1

Query: 743 EVTDGACSLGVGQA*DGVAS*GPSVSWNPGVRCH--RPSNSNCG 618
           E +  A +L V  + D   S GP++SW  G RC    P + NCG
Sbjct: 97  ETSTLAVNLKVVTSIDAQDSTGPTLSWEFGSRCDYLTPESQNCG 140


>AY071422-1|AAL49044.1|  318|Drosophila melanogaster RE50056p
           protein.
          Length = 318

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +1

Query: 211 WVRHEISQMTEELLALFEPRETWFSDAEVQTSVQSY 318
           ++ H   +M E L+A  EPR +WF D+EV ++ + Y
Sbjct: 43  FITHPDGRMME-LVAFTEPRRSWFVDSEVCSNGRIY 77


>AE014298-1937|AAF48299.1|  340|Drosophila melanogaster CG11164-PA
           protein.
          Length = 340

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +1

Query: 211 WVRHEISQMTEELLALFEPRETWFSDAEVQTSVQSY 318
           ++ H   +M E L+A  EPR +WF D+EV ++ + Y
Sbjct: 65  FITHPDGRMME-LVAFTEPRRSWFVDSEVCSNGRIY 99


>AE014134-1411|AAN11152.1|  455|Drosophila melanogaster CG31900-PA
           protein.
          Length = 455

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -1

Query: 743 EVTDGACSLGVGQA*DGVAS*GPSVSWNPGVRCH--RPSNSNCG 618
           E +  A +L V  + D   S GP++SW  G RC    P + NCG
Sbjct: 283 ETSTLAVNLKVVTSIDAQDSTGPTLSWEFGSRCDYLTPESQNCG 326


>AE014134-630|AAF51090.1|  807|Drosophila melanogaster CG15415-PA
           protein.
          Length = 807

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -2

Query: 286 LKTKFPS-AQKAQGAPQSSGKSHDEPKTAPKSAAE 185
           LKT  P     A  +P SS + H  P+T+ KSAAE
Sbjct: 448 LKTALPRIVSVAAQSPSSSAQLHTHPETSLKSAAE 482


>X04813-1|CAA28502.1| 2236|Drosophila melanogaster protein (
            Drosophila melanogasterrudimentary gene. ).
          Length = 2236

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -3

Query: 729  SLFSWGWTGMRWRRVVRSFCFM 664
            S   W WT  RWR    SFC M
Sbjct: 1013 SFEEWSWTSTRWRIARASFCPM 1034


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,313,618
Number of Sequences: 53049
Number of extensions: 771730
Number of successful extensions: 2196
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2188
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)