Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0517
(626 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory recept... 25 0.39
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 23 2.1
AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like pr... 23 2.8
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 22 3.7
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 22 3.7
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 22 4.8
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 21 8.4
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 21 8.4
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 21 8.4
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 21 8.4
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 21 8.4
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 21 8.4
>AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory receptor
candidate 31 protein.
Length = 250
Score = 25.4 bits (53), Expect = 0.39
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 544 FNSGFSRVFGFITVSLCAAALAHA 473
+ + +S +F I SLC A L HA
Sbjct: 70 YKTAYSAIFTVIDFSLCKAILVHA 93
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 23.0 bits (47), Expect = 2.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 228 LCSPSEAVCCSQRLSCTSCLK 290
L P++ V C + LSC S L+
Sbjct: 131 LSDPNQCVICHRVLSCKSALQ 151
>AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like
protein protein.
Length = 242
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 11 RANRQTNKMAYRHSHDHDDDTDGIV 85
R ++ NKM + + DDD D +V
Sbjct: 140 RRLKKENKMTWEPKNKTDDDDDALV 164
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/49 (18%), Positives = 23/49 (46%)
Frame = -3
Query: 408 TNSSIRYIMKKPQHVNRGVSEKSNSWRMFLACKFSMFSWTSGMTCMKVV 262
T+ +R+ ++K V R + E +W + + ++ SG+ + +
Sbjct: 604 TSPKMRHELQKLAQVYRILGETIETWNKLFGYQILLITFQSGLNVVSCI 652
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 22.2 bits (45), Expect = 3.7
Identities = 8/28 (28%), Positives = 12/28 (42%)
Frame = -3
Query: 333 WRMFLACKFSMFSWTSGMTCMKVVESST 250
W AC+ W + TC ++V T
Sbjct: 330 WAFSNACEVMAIVWITSETCEEIVAGVT 357
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 21.8 bits (44), Expect = 4.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 147 GIRPHIMEAQKSTTMEMPLA 88
G+RPH++E K + P A
Sbjct: 164 GLRPHLLENVKKSGYTKPTA 183
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 259 EQHTASEGEQSHHHPVR 209
EQ T S Q HH P++
Sbjct: 97 EQQTHSSIHQHHHDPMK 113
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 21.0 bits (42), Expect = 8.4
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +2
Query: 248 GVLLSTTFMHVMPEVQENIENLQARNILQEFD 343
GV ++ H++P++Q ++NL Q D
Sbjct: 596 GVFVAFLLKHIVPKLQLCMQNLVINPHQQHLD 627
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/26 (26%), Positives = 12/26 (46%)
Frame = +3
Query: 36 WLTDTAMTTMTIQMVLYWPKAFPWWC 113
+LT + + + + WPK WC
Sbjct: 92 FLTGVMASLLFLNLAKRWPKFVKDWC 117
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/26 (26%), Positives = 12/26 (46%)
Frame = +3
Query: 36 WLTDTAMTTMTIQMVLYWPKAFPWWC 113
+LT + + + + WPK WC
Sbjct: 92 FLTGVMASLLFLNLAKRWPKFVKDWC 117
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 259 EQHTASEGEQSHHHPVR 209
EQ T S Q HH P++
Sbjct: 248 EQQTHSSIHQHHHDPMK 264
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 259 EQHTASEGEQSHHHPVR 209
EQ T S Q HH P++
Sbjct: 307 EQQTHSSIHQHHHDPMK 323
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,755
Number of Sequences: 336
Number of extensions: 3491
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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