Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0517
(626 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39160| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.047
SB_29288| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_54814| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_53470| Best HMM Match : E-MAP-115 (HMM E-Value=7.6) 31 0.77
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 30 1.3
SB_48736| Best HMM Match : RVT_1 (HMM E-Value=1.4e-11) 30 1.3
SB_45778| Best HMM Match : Exo_endo_phos (HMM E-Value=1e-10) 30 1.3
SB_39367| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 30 1.3
SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20) 30 1.3
SB_21418| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_10446| Best HMM Match : Exo_endo_phos (HMM E-Value=6.6e-20) 30 1.3
SB_4456| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_58162| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-14) 30 1.3
SB_45353| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_39096| Best HMM Match : Exo_endo_phos (HMM E-Value=4.6e-10) 30 1.3
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_3218| Best HMM Match : Ribosomal_S25 (HMM E-Value=0.65) 30 1.8
SB_662| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_8710| Best HMM Match : PKD_channel (HMM E-Value=0) 29 3.1
SB_18939| Best HMM Match : Adeno_E3_CR2 (HMM E-Value=4.6) 29 4.1
SB_57006| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_15022| Best HMM Match : Zona_pellucida (HMM E-Value=5.6e-38) 28 5.4
SB_43092| Best HMM Match : 7tm_1 (HMM E-Value=0.23) 28 5.4
SB_33339| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.15) 28 7.1
SB_24022| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_11394| Best HMM Match : GntR (HMM E-Value=7.9) 28 7.1
SB_47040| Best HMM Match : PLAT (HMM E-Value=8.7e-12) 28 7.1
SB_8672| Best HMM Match : PKD_channel (HMM E-Value=1.4e-38) 28 7.1
SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29) 27 9.4
SB_48543| Best HMM Match : Exo_endo_phos (HMM E-Value=7.8e-06) 27 9.4
SB_14667| Best HMM Match : MbeB_N (HMM E-Value=1) 27 9.4
SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28) 27 9.4
>SB_39160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 35.1 bits (77), Expect = 0.047
Identities = 19/85 (22%), Positives = 40/85 (47%)
Frame = +2
Query: 341 DFSLTPLLTCCGFFIMYLIEELVHIYIHHREKNNGQTDLLVRNLSVRKSRCTEGHSNEAK 520
D +T L C + + +++ Y +H ++N Q + R L+ ++ C EG+ N+
Sbjct: 97 DAEVTRLKNRCEYMVEQHEDDITEWYWNHPDENLTQWLCIERVLNSHETDCLEGNQNKEV 156
Query: 521 NSTESGIESPEKNREHEANNPQSRK 595
++ SG+E + E + + K
Sbjct: 157 SAAGSGMEKKSDKEKGEMDEKKVNK 181
>SB_29288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 33.5 bits (73), Expect = 0.14
Identities = 34/162 (20%), Positives = 71/162 (43%), Gaps = 6/162 (3%)
Frame = +2
Query: 131 ICGLIPQIIARKFRWLSVEDAGTFKS--TNRVVMTLLSFGGGVLLSTTFMHVMPEVQENI 304
+CG++P ++ + VE + T + LLSF G LL F+H++PE +
Sbjct: 75 LCGVLPVLL------IPVESGHALREGVTADHLRLLLSFAVGGLLGDVFLHLLPEAWSSG 128
Query: 305 ENLQARNILQEFDFSLTPLLTCCGFFIMYLIEELVHIYIHHREKNNGQTDL-LVRNLSVR 481
+ + + F + G F+ +++E+ E + + +++N + +
Sbjct: 129 DKGDDSHSVNFF----VGMWVIVGLFLFFILEKAFGEDDEEEESTKQKEKVEVIQNGAAK 184
Query: 482 KSRCTE-GHSNEAKNSTESGIESPEKNR--EHEANNPQSRKS 598
S+ + GHS+ N T ++ + R E+ ++P KS
Sbjct: 185 NSKILQNGHSHAHMNGTSHHQQNDVRKRHTENAKSSPDPIKS 226
>SB_54814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 32.3 bits (70), Expect = 0.33
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = +2
Query: 194 GTFKSTNRVVMTLLSFGGGVLLSTTF-MHVMPEVQENIENLQARNILQEFDFSLTPLLTC 370
G + T RV L S G ++ST + + E ++ + I LT
Sbjct: 232 GNYIETERV--ELFSDGAFAIVSTLLVLDITAENFPTVDEVNENGIETMLANMWREFLTF 289
Query: 371 CGFFIMYLIEELVHIYIHHREKNNGQTDLLVRNLSV 478
CG FI+ + H + H +N Q L++ NLS+
Sbjct: 290 CGTFIIVALLWFTHHSLFHYIRNMNQVMLVINNLSL 325
>SB_53470| Best HMM Match : E-MAP-115 (HMM E-Value=7.6)
Length = 192
Score = 31.1 bits (67), Expect = 0.77
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +2
Query: 422 HHREKNNGQTDLLVRNLSVRKSRCTEGHSNEAKNSTESGIESPEKNREHEANNPQSRKS 598
H E+NN D R+ R +GH E N E + E+N EHE + + R +
Sbjct: 39 HDEERNNEHED---RHDEERNDEDEDGHDEERNNEHEDRHDE-ERNNEHEDRHDEERNN 93
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 422 HHREKNNGQTDLLVRNLSVRKSRCTEGHSNEAKNSTESGIESPEKNREHEANNPQSRKST 601
H E+N+ D R+ R + + H E + E G + E+N EHE + + R +
Sbjct: 27 HDEERNDEDED---RHDEERNNEHEDRHDEERNDEDEDGHDE-ERNNEHEDRHDEERNNE 82
Query: 602 H 604
H
Sbjct: 83 H 83
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 422 HHREKNNGQTDLLVRNLSVRKSRCTEGHSNEAKNSTESGIESPEKNREHEANNPQSRKS 598
H E+NN D R+ R + + H E +N+ E E+N EHE + + R +
Sbjct: 63 HDEERNNEHED---RHDEERNNEHEDRHDEE-RNNEEEDKHDEERNNEHEDRHDEERNN 117
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = +2
Query: 422 HHREKNNGQTDLLVRNLSVRKSRCTEGHSNEAKNSTESGIESPEKNREHEANNPQSRKST 601
H E+NN + D ++ R + + H E N E + E+N EHE + + R
Sbjct: 87 HDEERNNEEED---KHDEERNNEHEDRHDEERNNEDEDRHDE-ERNNEHEDRHDKGRNDD 142
Query: 602 HSPHAYTG 625
+ G
Sbjct: 143 EEEDRHDG 150
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -3
Query: 366 VNRGVSEKSNSWRMFLACKFSMFSWTSGMTCMKVVESSTPPPKESRVITTR--FVDLNV 196
+ + ++ K N+ +F A ++ S T+ + M++V PPP + +TTR F D +V
Sbjct: 83 LRKALNVKPNTSTVFKALEYVDLSITASSSSMRLVTVYRPPPSKVNKLTTRMFFDDFSV 141
>SB_48736| Best HMM Match : RVT_1 (HMM E-Value=1.4e-11)
Length = 1175
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -3
Query: 366 VNRGVSEKSNSWRMFLACKFSMFSWTSGMTCMKVVESSTPPPKESRVITTR--FVDLNV 196
+ + ++ K N+ +F A ++ S T+ + M++V PPP + +TTR F D +V
Sbjct: 83 LRKALNVKPNTSTVFKALEYVDLSITASSSSMRLVTVYRPPPSKVNKLTTRMFFDDFSV 141
>SB_45778| Best HMM Match : Exo_endo_phos (HMM E-Value=1e-10)
Length = 549
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -3
Query: 366 VNRGVSEKSNSWRMFLACKFSMFSWTSGMTCMKVVESSTPPPKESRVITTR--FVDLNV 196
+ + ++ K N+ +F A ++ S T+ + M++V PPP + +TTR F D +V
Sbjct: 83 LRKALNVKPNTSTVFKALEYVDLSITASSSSMRLVTVYRPPPSKVNKLTTRMFFDDFSV 141
>SB_39367| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 903
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -3
Query: 366 VNRGVSEKSNSWRMFLACKFSMFSWTSGMTCMKVVESSTPPPKESRVITTR--FVDLNV 196
+ + ++ K N+ +F A ++ S T+ + M++V PPP + +TTR F D +V
Sbjct: 83 LRKALNVKPNTSTVFKALEYVDLSITASSSSMRLVTVYRPPPSKVNKLTTRMFFDDFSV 141
>SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20)
Length = 672
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -3
Query: 366 VNRGVSEKSNSWRMFLACKFSMFSWTSGMTCMKVVESSTPPPKESRVITTR--FVDLNV 196
+ + ++ K N+ +F A ++ S T+ + M++V PPP + +TTR F D +V
Sbjct: 387 LRKALNVKPNTSTVFKALEYVDLSITASSSSMRLVTVYRPPPSKVNKLTTRMFFDDFSV 445
>SB_21418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -3
Query: 366 VNRGVSEKSNSWRMFLACKFSMFSWTSGMTCMKVVESSTPPPKESRVITTR--FVDLNV 196
+ + ++ K N+ +F A ++ S T+ + M++V PPP + +TTR F D +V
Sbjct: 187 LRKALNVKPNTSTVFKALEYVDLSITASSSSMRLVTVYRPPPSKVNKLTTRMFFDDFSV 245
>SB_10446| Best HMM Match : Exo_endo_phos (HMM E-Value=6.6e-20)
Length = 1285
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -3
Query: 366 VNRGVSEKSNSWRMFLACKFSMFSWTSGMTCMKVVESSTPPPKESRVITTR--FVDLNV 196
+ + ++ K N+ +F A ++ S T+ + M++V PPP + +TTR F D +V
Sbjct: 766 LRKALNVKPNTSTVFKALEYVDLSITASRSSMRLVTVYRPPPSKVNKLTTRMFFDDFSV 824
>SB_4456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -3
Query: 366 VNRGVSEKSNSWRMFLACKFSMFSWTSGMTCMKVVESSTPPPKESRVITTR--FVDLNV 196
+ + ++ K N+ +F A ++ S T+ + M++V PPP + +TTR F D +V
Sbjct: 477 LRKALNVKPNTSTVFKALEYVDLSITASSSSMRLVTVYRPPPSKVNKLTTRMFFDDFSV 535
>SB_58162| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-14)
Length = 624
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -3
Query: 366 VNRGVSEKSNSWRMFLACKFSMFSWTSGMTCMKVVESSTPPPKESRVITTR--FVDLNV 196
+ + ++ K N+ +F A ++ S T+ + M++V PPP + +TTR F D +V
Sbjct: 324 LRKALNVKPNTSTVFKALEYVDLSITASSSSMRLVTVFRPPPSKVNKLTTRMFFDDFSV 382
>SB_45353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -3
Query: 366 VNRGVSEKSNSWRMFLACKFSMFSWTSGMTCMKVVESSTPPPKESRVITTR--FVDLNV 196
+ + ++ K N+ +F A ++ S T+ + M++V PPP + +TTR F D +V
Sbjct: 83 LRKALNVKPNTSTVFKALEYVDLSITASSSSMRLVTVYRPPPSKVNKLTTRMFFDDFSV 141
>SB_39096| Best HMM Match : Exo_endo_phos (HMM E-Value=4.6e-10)
Length = 279
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -3
Query: 366 VNRGVSEKSNSWRMFLACKFSMFSWTSGMTCMKVVESSTPPPKESRVITTR--FVDLNV 196
+ + ++ K N+ +F A ++ S T+ + M++V PPP + +TTR F D +V
Sbjct: 83 LRKALNVKPNTSTVFKALEYVDLSITASSSSMRLVTVYRPPPSKVNKLTTRMFFDDFSV 141
>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 417 YMCTNSSIRYIMKKPQHVNRGVSEK-SNSWRMFLACKFSMFSWTSGMTCMKVVESS 253
Y+C + I + P+ V+ V E S SW L + + W SG TC +V S
Sbjct: 367 YLCRSWQILHFA--PRVVSASVIEGVSRSWNALLNGETKCYDWNSGYTCHQVGSGS 420
>SB_3218| Best HMM Match : Ribosomal_S25 (HMM E-Value=0.65)
Length = 290
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +2
Query: 482 KSRCTEGHSNEAKNSTESGIESPEKNREHEANNPQS 589
K + TEG+ N+ +N++E+G++ + N++ + S
Sbjct: 91 KLKVTEGNENDNENASENGVDIADYNKDEKGKKSHS 126
>SB_662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 473 SVRKSRCTEGHSNEAKNSTESG-IESPEKNREHEANNPQSRKSTHS 607
S+ S T G SN K S + I SP+ N + + PQS K T S
Sbjct: 48 SISSSSITSGGSNSPKPSLPNAVISSPQMNGTNGSPTPQSGKKTPS 93
>SB_8710| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 1627
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/86 (27%), Positives = 40/86 (46%)
Frame = +2
Query: 230 LLSFGGGVLLSTTFMHVMPEVQENIENLQARNILQEFDFSLTPLLTCCGFFIMYLIEELV 409
L SFG GV+++ + +V N N+ A +FS+ L T CG F++Y+I ++
Sbjct: 599 LTSFGAGVMVAPNPID-FDQVFANFANITATG-----NFSV--LFTVCGLFLLYIIAIIL 650
Query: 410 HIYIHHREKNNGQTDLLVRNLSVRKS 487
R+K +L + KS
Sbjct: 651 ARRADKRDKKMVANAVLAAPVPTSKS 676
>SB_18939| Best HMM Match : Adeno_E3_CR2 (HMM E-Value=4.6)
Length = 99
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 44 RHSHDHDDDTDGIVLAK-GISMVVLFCASMICGLIPQIIARK 166
R H DD++ I +A I+ V+ A +ICGL+ I+ +K
Sbjct: 50 REREKHYDDSNVITIAAVAIAAVITCMALIICGLVYYIVKQK 91
>SB_57006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 28.3 bits (60), Expect = 5.4
Identities = 22/89 (24%), Positives = 41/89 (46%)
Frame = +2
Query: 47 HSHDHDDDTDGIVLAKGISMVVLFCASMICGLIPQIIARKFRWLSVEDAGTFKSTNRVVM 226
H HDH +D AK I++V+ +S I + P+I+ + E T ST R+ +
Sbjct: 507 HLHDHTYSSDDKRTAKAIAIVI---SSFILLVYPRIVLIFYHMFRPETLQT--STARLWL 561
Query: 227 TLLSFGGGVLLSTTFMHVMPEVQENIENL 313
+L + V+ + M E + +++
Sbjct: 562 RILIYTNSVMNPILYAWRMEEFRREFKHI 590
>SB_15022| Best HMM Match : Zona_pellucida (HMM E-Value=5.6e-38)
Length = 525
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 452 DLLVRNLSVRKSRCTEGHSNEAKNSTESGIE 544
++LV S +KSRCT+G + + E+GIE
Sbjct: 231 EVLVCQRSDKKSRCTKGCPYQRRRRRETGIE 261
>SB_43092| Best HMM Match : 7tm_1 (HMM E-Value=0.23)
Length = 417
Score = 28.3 bits (60), Expect = 5.4
Identities = 22/89 (24%), Positives = 41/89 (46%)
Frame = +2
Query: 47 HSHDHDDDTDGIVLAKGISMVVLFCASMICGLIPQIIARKFRWLSVEDAGTFKSTNRVVM 226
H HDH +D AK I++V+ +S I + P+I+ + E T ST R+ +
Sbjct: 320 HLHDHTYSSDDKRTAKAIAIVI---SSFILLVYPRIVLIFYHMFRPETLHT--STARLWL 374
Query: 227 TLLSFGGGVLLSTTFMHVMPEVQENIENL 313
+L + V+ + M E + +++
Sbjct: 375 RILIYTNSVMNPILYAWRMEEFRREFKHI 403
>SB_33339| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.15)
Length = 1224
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -3
Query: 291 TSGMTCMKVVESSTPPPKESRVITTRFVDLNVPASSTESHRNF 163
TSG C ++ S PKE + FV +N AS S + +
Sbjct: 157 TSGRICERIPRSQGRKPKELSYASGGFVRVNAKASKARSKKYY 199
>SB_24022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2
Query: 335 EFDFSLTPLLTCCGFFIMYLIEELVHIYIHHREKNNGQTDLLVR 466
E SL LL C +YL +E V Y H ++K G + LVR
Sbjct: 137 ESSSSLKQLLHQCMIHPIYLRQEEVLGYFHMQKKQKGVDEALVR 180
>SB_11394| Best HMM Match : GntR (HMM E-Value=7.9)
Length = 451
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 228 LCSPSEAVCCSQRLSCTSCLKSKRTLKI 311
+CS CCS R+ C SC + L++
Sbjct: 277 VCSSCRVACCSCRVVCYSCRVTHAVLRV 304
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 231 CSPSEAVCCSQRLSCTSCLKSKRTLKI 311
C VCCS R+ C SC + L++
Sbjct: 379 CCSCRVVCCSCRVVCCSCRVAHAVLRV 405
>SB_47040| Best HMM Match : PLAT (HMM E-Value=8.7e-12)
Length = 549
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -3
Query: 336 SWR-MFLACKFSMFSWTSGMTCMKVVESSTPPPKE 235
SWR + + + S+ + G+ C+ + + S PPPK+
Sbjct: 296 SWRQIMIGVQSSLITLPVGLICVALFQYSRPPPKQ 330
>SB_8672| Best HMM Match : PKD_channel (HMM E-Value=1.4e-38)
Length = 1523
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -3
Query: 336 SWR-MFLACKFSMFSWTSGMTCMKVVESSTPPPKE 235
SWR + + + S+ + G+ C+ + + S PPPK+
Sbjct: 356 SWRQIMIGVQSSLITLPVGLICVALFQYSRPPPKQ 390
>SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29)
Length = 462
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2
Query: 268 SR*EQHTASEGEQSHHHPVRRLERPRVFYGEPSKLSR 158
SR EQ T EG+ +H R+E P GE K SR
Sbjct: 177 SRQEQKTPEEGKNKNHQKRARIETPE--EGEKKKNSR 211
>SB_48543| Best HMM Match : Exo_endo_phos (HMM E-Value=7.8e-06)
Length = 768
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -3
Query: 360 RGVSEKSNSWRMFLACKFSMFSWTSGMTCMKVVESSTPPPKESRVITTR--FVDLNV 196
+ ++ K N+ +F A ++ T+ + M++V PPP + +TTR F D +V
Sbjct: 330 KALNVKPNTSAVFKALEYVDLFITASSSSMRLVTVYRPPPSKVNKLTTRMFFDDFSV 386
>SB_14667| Best HMM Match : MbeB_N (HMM E-Value=1)
Length = 188
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 384 MKKPQHVNRGVSEKSNSWR 328
++KPQH+ R SE NS+R
Sbjct: 73 VEKPQHIKRDFSEHKNSYR 91
>SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28)
Length = 562
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/84 (19%), Positives = 33/84 (39%)
Frame = +2
Query: 356 PLLTCCGFFIMYLIEELVHIYIHHREKNNGQTDLLVRNLSVRKSRCTEGHSNEAKNSTES 535
PL T CG I EL ++++ NN + N + + ++N N+ +
Sbjct: 44 PLQTTCGHRICESCFELSLRHLNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 103
Query: 536 GIESPEKNREHEANNPQSRKSTHS 607
+ N + NN + + ++
Sbjct: 104 NNNNNNNNNNNNNNNNNNNNNNNN 127
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,162,607
Number of Sequences: 59808
Number of extensions: 449337
Number of successful extensions: 1657
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1652
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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