Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0517
(626 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80447-10|AAB37814.1| 477|Caenorhabditis elegans Hypothetical p... 73 1e-13
U42437-4|AAA83498.2| 349|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z70306-5|CAO82011.1| 337|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z70306-4|CAH04694.1| 363|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical ... 50 2e-06
AF100659-8|AAC68966.1| 688|Caenorhabditis elegans Hypothetical ... 33 0.22
U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z50863-1|CAA90736.3| 353|Caenorhabditis elegans Hypothetical pr... 31 0.89
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 31 0.89
U28944-12|AAA68371.2| 363|Caenorhabditis elegans Hypothetical p... 29 2.1
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 28 4.8
AC024808-3|AAK29925.1| 183|Caenorhabditis elegans Hypothetical ... 28 4.8
Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL021472-4|CAA16301.1| 149|Caenorhabditis elegans Hypothetical ... 28 6.3
AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein. 28 6.3
AF100670-2|AAN73857.3| 554|Caenorhabditis elegans Hypothetical ... 27 8.3
>U80447-10|AAB37814.1| 477|Caenorhabditis elegans Hypothetical
protein F55F8.9 protein.
Length = 477
Score = 73.3 bits (172), Expect = 1e-13
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
Frame = +2
Query: 86 LAKGISMVVLFCASMICGLIPQIIARKFRW--LSVEDAGTFKSTNRVVMTLLSFGGGVLL 259
+ K + M V+F ++I GL P + K R + + + K + V+ L F GGV L
Sbjct: 5 ILKLVLMFVMFSLTVIVGLSPLKVLHKLRHEAATAQSSSKHKHVSLVLCLLTCFSGGVFL 64
Query: 260 STTFMHVMPEVQENIENLQARNILQEFDFSLTPLLTCCGFFIMYLIEELVHIYI 421
+T F+H+ PE++EN+E L + + D+ + LL+C GFF+++ +EE+V + I
Sbjct: 65 ATCFLHLFPELRENLETLDTVHNFR-IDYPVGELLSCLGFFLIFFLEEVVIMII 117
>U42437-4|AAA83498.2| 349|Caenorhabditis elegans Hypothetical
protein F30B5.7 protein.
Length = 349
Score = 55.6 bits (128), Expect = 3e-08
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Frame = +2
Query: 113 LFCASMICGLIPQIIARKFRWLSVEDAGTFKSTNRVVMTLLSFGGGVLLSTTFMHVMPEV 292
+F + G++P I R + E + S L F GGV L+T F+ ++P +
Sbjct: 15 MFVVTAAIGIVPLFIVRVMKRSQNESEQGYLSY------LTCFAGGVFLATCFLDIIPHI 68
Query: 293 QENIENLQARNILQEFDFSLTPLLTCCGFFIMYLIEEL-VHIYIHHREKNNGQTDLLVRN 469
E E L L + F+ +TCCGFF +Y IEE ++ + ++ +G + L +
Sbjct: 69 NEGYEELMETYDLN-WHFAYPQFVTCCGFFFIYFIEEFTTFVFGNGQQPGHGHSHSLNKG 127
Query: 470 LSVRKS---RCTEGHSNEAKNS 526
+ + R + G E K S
Sbjct: 128 NKITTTSDGRLSPGMPKERKGS 149
>Z70306-5|CAO82011.1| 337|Caenorhabditis elegans Hypothetical
protein C06G8.3c protein.
Length = 337
Score = 53.6 bits (123), Expect = 1e-07
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Frame = +2
Query: 71 TDGIVLA-KGISMVVLFCASMICGLIPQIIARKFRWLSVEDAGTFKSTNRVVMTLLSFGG 247
T+G LA + + +VL + + G P ++ ++ G ++ + + L F G
Sbjct: 2 TEGGYLALQSVLALVLLVVTAVAGSAPLLLLT-----FLKKKGKDQNDSGWLSYLSCFSG 56
Query: 248 GVLLSTTFMHVMPEVQENI-ENLQARNILQEFDFSLTPLLTCCGFFIMYLIEEL 406
GV ++T F+ VMP VQ+ E L+ N+ EF + L C GFF +YLIEE+
Sbjct: 57 GVFMATCFLDVMPHVQQTYGEILETYNV--EFRLPMNQLFICVGFFFVYLIEEI 108
>Z70306-4|CAH04694.1| 363|Caenorhabditis elegans Hypothetical
protein C06G8.3b protein.
Length = 363
Score = 53.6 bits (123), Expect = 1e-07
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Frame = +2
Query: 71 TDGIVLA-KGISMVVLFCASMICGLIPQIIARKFRWLSVEDAGTFKSTNRVVMTLLSFGG 247
T+G LA + + +VL + + G P ++ ++ G ++ + + L F G
Sbjct: 2 TEGGYLALQSVLALVLLVVTAVAGSAPLLLLT-----FLKKKGKDQNDSGWLSYLSCFSG 56
Query: 248 GVLLSTTFMHVMPEVQENI-ENLQARNILQEFDFSLTPLLTCCGFFIMYLIEEL 406
GV ++T F+ VMP VQ+ E L+ N+ EF + L C GFF +YLIEE+
Sbjct: 57 GVFMATCFLDVMPHVQQTYGEILETYNV--EFRLPMNQLFICVGFFFVYLIEEI 108
>AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical
protein Y54G9A.4 protein.
Length = 319
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Frame = +2
Query: 86 LAKGISMVVLFCASMICGLIPQIIARKFRWLSVEDAGTFKSTNRVVMTLLSFGGGVLLST 265
L K I + V+ ++I GL+P + +L+ + + ++ ++ F GGV LS
Sbjct: 5 LLKWIMLGVMALMTIIFGLLP---IKVISYLNTTKSAIHQHSSLILSLFSCFAGGVFLSV 61
Query: 266 TFMHVMPEVQENIENLQARNILQEFDFSLTPLLTCCGFFIMYLIEELVHIYIHHREKNNG 445
F+ ++P+ E E++Q D+ L+ GFF +YL EEL + + ++
Sbjct: 62 CFLDMLPDCLEAWESVQTDTNYTS-DYPFVQLIALLGFFFVYLTEELSSVICNVGHGHSH 120
Query: 446 QTD-LLVRNLSVRKSR 490
D ++ N++ ++R
Sbjct: 121 SNDPIMESNVTFPRAR 136
>AF100659-8|AAC68966.1| 688|Caenorhabditis elegans Hypothetical
protein F58E2.3 protein.
Length = 688
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 231 CSPSEAVCCSQRLSCTSCLKSKRTLKICKRGTFSKNLISH 350
C V S+ L CTS S+ ++K+ G KN++SH
Sbjct: 296 CEELRNVQSSKELECTSLCTSELSIKVLHNGLLMKNILSH 335
>U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical
protein F33G12.5 protein.
Length = 928
Score = 31.1 bits (67), Expect = 0.67
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +2
Query: 431 EKNNGQTDLLVRNLSVRKSR----CTEGHSNEAKNSTESGIESPEKNREHEA 574
EK + Q+DL N + K R E +N+ NST SG+ S E + +EA
Sbjct: 148 EKVSSQSDLRQANKQIEKLRHKLAAAENIANQMSNSTSSGLSSNEIRKLNEA 199
>Z50863-1|CAA90736.3| 353|Caenorhabditis elegans Hypothetical
protein C14H10.1 protein.
Length = 353
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 230 LLSFGGGVLLSTTFMHVMPEVQENIEN 310
LL F G LL+ F+H++PE E+ EN
Sbjct: 150 LLGFAIGSLLADVFLHLLPEAYESNEN 176
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 30.7 bits (66), Expect = 0.89
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +2
Query: 422 HHREKNNGQTDLLVRNLSVRKSRCTEG--HSNEAKNSTESG-IESPEKNREHEANNPQSR 592
HH + ++ R+ SV+ SR +E H E S S S E E + ++
Sbjct: 664 HHDRSSPVASEPAARSPSVQSSRTSEHFEHRGEVPQSPSSNQFHSSEHIEEARQSPVTNQ 723
Query: 593 KSTHSPHA 616
+S HSPHA
Sbjct: 724 ESVHSPHA 731
>U28944-12|AAA68371.2| 363|Caenorhabditis elegans Hypothetical
protein C18A3.2 protein.
Length = 363
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +2
Query: 248 GVLLSTTFMHVMPEVQENIENLQA-RNILQEFDF-SLTPLLTCCGFFIMYLIEELVH 412
GV ++T F+ ++P V+ +L+ + I+ + + T L GF I+ + E+++H
Sbjct: 50 GVFIATCFLGLVPHVRHQEMHLRGNQTIVDSYGWIPSTDQLVIIGFLIILITEQIIH 106
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -2
Query: 286 RHDVHESR*EQHTASEGEQSHHHPVRRLERPRVFYGEPSKLSRDDL 149
+H +H +QH AS Q HHP R P Y +PS + L
Sbjct: 92 QHQLHHQN-QQHQASTSTQQFHHPQR---PPPPQYDQPSSSTGSSL 133
>AC024808-3|AAK29925.1| 183|Caenorhabditis elegans Hypothetical
protein Y53G8AM.6 protein.
Length = 183
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -2
Query: 484 LAHAQISDQ*ICLSIILLSVMNVYVHQFFYQI 389
LA Q+S + +C+ I+L V NV+VH +Y +
Sbjct: 46 LASFQVSIE-VCVRILLSLVHNVFVHASYYNV 76
>Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical
protein DY3.7 protein.
Length = 922
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 231 CSPSEAVCCSQRLSCTSCLKSKRTLKICKRGTFSKNL 341
CSPS+ CC+ T L K KIC++ + NL
Sbjct: 564 CSPSQGYCCNPD---TCSLHGKNEEKICRQESECSNL 597
>AL021472-4|CAA16301.1| 149|Caenorhabditis elegans Hypothetical
protein Y17D7B.4 protein.
Length = 149
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 234 SPSEAVCCSQRLSCTSCLKSKRTLKICKRGT 326
+PS+AVC + C + ++ T CK GT
Sbjct: 74 TPSQAVCNVSNVDCGTYVRGPETWSSCKLGT 104
>AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein.
Length = 922
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 231 CSPSEAVCCSQRLSCTSCLKSKRTLKICKRGTFSKNL 341
CSPS+ CC+ T L K KIC++ + NL
Sbjct: 564 CSPSQGYCCNPD---TCSLHGKNEEKICRQESECSNL 597
>AF100670-2|AAN73857.3| 554|Caenorhabditis elegans Hypothetical
protein M4.1 protein.
Length = 554
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 263 TTFMHVMPEVQENIENLQARNILQEFDFS 349
T M MPEVQEN L+A ++ + +FS
Sbjct: 470 TAAMATMPEVQENHGCLEASSLKETLEFS 498
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,565,630
Number of Sequences: 27780
Number of extensions: 338636
Number of successful extensions: 1224
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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