Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0515
         (797 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46753-6|AAO21474.1|  740|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U46753-5|ABB88235.1|  803|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U46753-4|AAO21475.1|  764|Caenorhabditis elegans Hypothetical pr...    28   6.7  

>U46753-6|AAO21474.1|  740|Caenorhabditis elegans Hypothetical
           protein C34F11.3a protein.
          Length = 740

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = +3

Query: 39  LPERLQRILNNSRATRAR*VLYHYTVLSHKLEYTLASHLWR 161
           LPE LQ+ LN S +T    + +HYT  +   E+++A+ +W+
Sbjct: 626 LPEYLQKGLNVSLSTDDP-LQFHYTKEALMEEFSIAAQVWK 665


>U46753-5|ABB88235.1|  803|Caenorhabditis elegans Hypothetical
           protein C34F11.3c protein.
          Length = 803

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = +3

Query: 39  LPERLQRILNNSRATRAR*VLYHYTVLSHKLEYTLASHLWR 161
           LPE LQ+ LN S +T    + +HYT  +   E+++A+ +W+
Sbjct: 689 LPEYLQKGLNVSLSTDDP-LQFHYTKEALMEEFSIAAQVWK 728


>U46753-4|AAO21475.1|  764|Caenorhabditis elegans Hypothetical
           protein C34F11.3b protein.
          Length = 764

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = +3

Query: 39  LPERLQRILNNSRATRAR*VLYHYTVLSHKLEYTLASHLWR 161
           LPE LQ+ LN S +T    + +HYT  +   E+++A+ +W+
Sbjct: 650 LPEYLQKGLNVSLSTDDP-LQFHYTKEALMEEFSIAAQVWK 689


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,192,195
Number of Sequences: 27780
Number of extensions: 302206
Number of successful extensions: 726
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)