Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0513
         (819 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g32775.1 68418.m03902 hypothetical protein                          31   1.2  
At3g30690.1 68416.m03890 hypothetical protein                          29   3.7  
At5g32405.1 68418.m03813 hypothetical protein                          29   4.9  
At5g32169.1 68418.m03692 hypothetical protein                          29   4.9  
At3g30700.1 68416.m03892 hypothetical protein                          28   8.6  
At3g05650.1 68416.m00629 disease resistance family protein conta...    28   8.6  

>At5g32775.1 68418.m03902 hypothetical protein
          Length = 240

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = -1

Query: 585 FKPEETLNRQNKTNHTTSLLAFPPKSPLQHSTIINHTIYYV*LSVAFCYSISVAFCYTTF 406
           F P  T +   +      L   P   P   ST++N + Y+V LS+     ++++  Y TF
Sbjct: 164 FIPHSTRHSSKRKKRRLQLFTRPLTRPRGSSTVLNPSQYFVVLSIRVSGYLAISSMYFTF 223


>At3g30690.1 68416.m03890 hypothetical protein
          Length = 206

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/60 (23%), Positives = 28/60 (46%)
 Frame = -1

Query: 585 FKPEETLNRQNKTNHTTSLLAFPPKSPLQHSTIINHTIYYV*LSVAFCYSISVAFCYTTF 406
           F P  T +   +      +   P   P   ST++N + Y+V LS+     ++++  Y++F
Sbjct: 130 FIPHSTRHSSTRKKRRLQIFTRPLTRPPGSSTVLNPSKYFVVLSIRVSGYLAISSMYSSF 189


>At5g32405.1 68418.m03813 hypothetical protein
          Length = 256

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = -1

Query: 585 FKPEETLNRQNKTNHTTSLLAFPPKSPLQHSTIINHTIYYV*LSVAFCYSISVAFCYTTF 406
           F P  T +   +      L   P   P   ST++N + Y+V LS+     ++++  Y +F
Sbjct: 130 FIPHSTRHSSTRKKRRLQLFTRPLTRPPGSSTVLNPSKYFVVLSIRVSGYLAISSMYFSF 189


>At5g32169.1 68418.m03692 hypothetical protein
          Length = 258

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = -1

Query: 585 FKPEETLNRQNKTNHTTSLLAFPPKSPLQHSTIINHTIYYV*LSVAFCYSISVAFCYTTF 406
           F P  T +   +      L   P   P   ST++N + Y+V LS+     ++++  Y +F
Sbjct: 130 FIPHSTRHSSTRKKRRLQLFTRPLTRPPGSSTVLNPSQYFVVLSIRVSGYLAISSMYFSF 189


>At3g30700.1 68416.m03892 hypothetical protein
          Length = 206

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/60 (25%), Positives = 26/60 (43%)
 Frame = -1

Query: 585 FKPEETLNRQNKTNHTTSLLAFPPKSPLQHSTIINHTIYYV*LSVAFCYSISVAFCYTTF 406
           F P  T +   +      L   P   P   ST++N + Y+V LS+      +++  Y +F
Sbjct: 130 FIPHSTRHSSTRKKRRLQLFTRPLTRPPGSSTVLNPSKYFVVLSIRVSGYFAISSMYFSF 189


>At3g05650.1 68416.m00629 disease resistance family protein contains
           leucine rich-repeat (LRR) domains Pfam:PF00560,
           INTERPRO:IPR001611; similar to Cf-4A protein
           [Lycopersicon esculentum] gi|3097197|emb|CAA73187
          Length = 868

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 651 NKAAGRNFSGSSKKSTEKISVNDHHFTAII 740
           N     + SG+   +T KISV DHH T +I
Sbjct: 363 NSIYSMDLSGNHVSATTKISVADHHPTQLI 392


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,952,619
Number of Sequences: 28952
Number of extensions: 346328
Number of successful extensions: 823
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1872844800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)