BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0512 (753 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_06_0182 + 20997071-20997832,20998010-20998150 30 2.3 03_02_0025 + 5084003-5084303,5084449-5084639,5084793-5084873,508... 29 5.2 06_03_0570 - 22363197-22363588,22363755-22366782 28 9.2 >11_06_0182 + 20997071-20997832,20998010-20998150 Length = 300 Score = 29.9 bits (64), Expect = 2.3 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -3 Query: 580 TRRRQLYSIHSEKKNLLPLN*TPNTRYIRRCAYYILNFNSRT 455 T+ LYS+ +K +LPL PN I C +I+N + R+ Sbjct: 10 TKATGLYSLVEKKAYVLPLQDLPNRHIIVSCYGWIVNADERS 51 >03_02_0025 + 5084003-5084303,5084449-5084639,5084793-5084873, 5084972-5085319,5085409-5086293 Length = 601 Score = 28.7 bits (61), Expect = 5.2 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -3 Query: 634 YNLKVSTVYFLQSNSQGQTRRRQLYSI 554 YN T+ ++QSN+ G R Q+Y+I Sbjct: 126 YNFDQGTILYIQSNACGTRERLQIYAI 152 >06_03_0570 - 22363197-22363588,22363755-22366782 Length = 1139 Score = 27.9 bits (59), Expect = 9.2 Identities = 14/49 (28%), Positives = 25/49 (51%) Frame = -2 Query: 245 DLRYMLYCCLCRERQHSLLPFSV*QRSQLTKYYYYDCRFEGILSVARSQ 99 +L +L L + + +P S+ + +QLT+ Y D F G++ A Q Sbjct: 538 NLSNLLILSLAQNSFYGKIPLSIGKLNQLTELYLQDNSFSGLIPKALGQ 586 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,737,747 Number of Sequences: 37544 Number of extensions: 259730 Number of successful extensions: 457 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 448 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 457 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 2004270760 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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