Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0511
         (777 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DD7B62 Cluster: PREDICTED: hypothetical protein;...    33   6.0  
UniRef50_Q8F8D6 Cluster: Putative uncharacterized protein; n=2; ...    33   6.0  

>UniRef50_UPI0000DD7B62 Cluster: PREDICTED: hypothetical protein;
           n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: hypothetical
           protein - Homo sapiens
          Length = 182

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
 Frame = +3

Query: 120 LLYKYLH-LAGFEPGTLLCTDRVTYHYTRRPLKMALL*NCKQYCSNQMTFHSFIYIYLYI 296
           LL+KYL       P  L+ T   TY YT   +          Y    +  +++IYIY YI
Sbjct: 30  LLHKYLRGRESRVPNILIYTYTFTYIYTYTYIYT--------YTYTYIYIYTYIYIYTYI 81

Query: 297 NKFLLSYIITSNANYEQYLYTINITAVT*Y 386
           N +   Y  T    Y  Y YT   T V  Y
Sbjct: 82  NTYTYVYTYTFTYVY-TYTYTYTFTYVYTY 110


>UniRef50_Q8F8D6 Cluster: Putative uncharacterized protein; n=2;
           Leptospira interrogans|Rep: Putative uncharacterized
           protein - Leptospira interrogans
          Length = 87

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
 Frame = -3

Query: 370 VILIVYKYCS*FALEVIMYDNKNLLIYKYIYMKE*KVIWFEQ-YCLQFYRRAIFNG 206
           +I+++Y +      + ++  NK  LI  +I  K+ K + F+Q YC +FY RA  +G
Sbjct: 20  LIILIYFFFIRVVEKFVVAINKTALINHFIKQKQDKELIFQQFYCSEFYNRASKHG 75


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,793,719
Number of Sequences: 1657284
Number of extensions: 11200920
Number of successful extensions: 24944
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24813
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)