Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0511
         (777 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g23190.1 68418.m02712 cytochrome P450 family protein contains...    29   4.5  
At5g01690.1 68418.m00086 cation/hydrogen exchanger, putative (CH...    28   7.9  

>At5g23190.1 68418.m02712 cytochrome P450 family protein contains
           Pfam profile: PF00067 cytochrome P450
          Length = 559

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = +2

Query: 188 LPLHQTAVKNGSPVKLQTILLK 253
           LP+ +T+VK+ SP+ LQ +LL+
Sbjct: 188 LPVLETSVKSSSPIDLQDVLLR 209


>At5g01690.1 68418.m00086 cation/hydrogen exchanger, putative
           (CHX27)  monovalent cation:proton antiporter family 2
           (CPA2) member, PMID:11500563
          Length = 732

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/52 (25%), Positives = 26/52 (50%)
 Frame = -1

Query: 768 DHVSPYLRNMYQANKELLLLNVFKLN*IRQLLHNAIYSLAFDVLSAFIIIIL 613
           D +     N  + N+E +L+  F     R+ +H  + ++AFD  +  +I+ L
Sbjct: 492 DQIVKAFHNFEKTNQETVLIECFTAVAPRKTMHEDVCAIAFDQETDIVILTL 543


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,394,564
Number of Sequences: 28952
Number of extensions: 239424
Number of successful extensions: 446
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1736283200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)