Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0510
(769 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20790.1 68414.m02603 F-box family protein contains Pfam:PF00... 42 3e-04
At1g15840.1 68414.m01901 expressed protein 39 0.004
At2g05440.2 68415.m00575 glycine-rich protein 38 0.010
At2g05440.1 68415.m00574 glycine-rich protein 37 0.017
At5g40490.1 68418.m04910 RNA recognition motif (RRM)-containing ... 36 0.030
At4g15460.1 68417.m02363 glycine-rich protein 36 0.030
At2g21660.2 68415.m02578 glycine-rich RNA-binding protein (GRP7)... 36 0.030
At1g26520.1 68414.m03232 cobalamin synthesis/P47K family protein... 36 0.039
At5g46730.1 68418.m05757 glycine-rich protein 35 0.052
At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin fa... 35 0.069
At5g59170.1 68418.m07416 proline-rich family protein contains pr... 34 0.091
At2g05510.1 68415.m00583 glycine-rich protein 34 0.091
At4g39260.1 68417.m05557 glycine-rich RNA-binding protein 8 (GRP... 34 0.12
At2g21660.1 68415.m02577 glycine-rich RNA-binding protein (GRP7)... 34 0.12
At2g05520.1 68415.m00584 glycine-rich protein (GRP) identical to... 34 0.12
At3g22330.1 68416.m02820 DEAD box RNA helicase, putative similar... 33 0.16
At1g02710.1 68414.m00222 glycine-rich protein 33 0.28
At5g07520.1 68418.m00861 glycine-rich protein (GRP18) Oleosin; g... 32 0.37
At5g66400.1 68418.m08374 dehydrin (RAB18) nearly identical to SP... 32 0.48
At5g61030.1 68418.m07659 RNA-binding protein, putative similar t... 32 0.48
At4g30460.1 68417.m04325 glycine-rich protein 32 0.48
At1g74230.1 68414.m08597 glycine-rich RNA-binding protein simila... 32 0.48
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 31 0.64
At4g01985.1 68417.m00265 expressed protein 31 0.64
At3g28780.1 68416.m03592 glycine-rich protein similar to H41 gen... 31 0.64
At2g17870.1 68415.m02070 cold-shock DNA-binding family protein c... 31 0.64
At1g48410.2 68414.m05409 argonaute protein (AGO1) identical to S... 31 0.64
At1g48410.1 68414.m05408 argonaute protein (AGO1) identical to S... 31 0.64
At1g27710.1 68414.m03387 glycine-rich protein 31 1.1
At5g19090.1 68418.m02269 heavy-metal-associated domain-containin... 30 1.5
At5g07540.1 68418.m00863 glycine-rich protein (GRP16) oleosin; g... 30 1.5
At3g60320.1 68416.m06742 expressed protein contains Pfam profile... 30 1.5
At2g28670.1 68415.m03485 disease resistance-responsive family pr... 30 1.5
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 30 2.0
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 30 2.0
At4g38680.1 68417.m05477 cold-shock DNA-binding family protein c... 30 2.0
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 30 2.0
At2g21060.1 68415.m02500 cold-shock DNA-binding family protein /... 30 2.0
At1g77030.1 68414.m08970 glycine-rich protein 30 2.0
At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger) fa... 30 2.0
At1g31750.1 68414.m03895 proline-rich family protein contains pr... 30 2.0
At3g06130.1 68416.m00704 heavy-metal-associated domain-containin... 29 2.6
At5g04290.1 68418.m00422 KOW domain-containing transcription fac... 29 3.4
At2g40610.1 68415.m05009 expansin, putative (EXP8) similar to ex... 29 3.4
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 29 3.4
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 29 3.4
At3g22310.1 68416.m02818 DEAD box RNA helicase, putative (RH9) s... 29 4.5
At3g04640.1 68416.m00497 glycine-rich protein predicted proteins... 29 4.5
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 29 4.5
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 25 5.5
At5g28640.1 68418.m03503 SSXT protein-related / glycine-rich pro... 28 6.0
At2g24570.1 68415.m02934 WRKY family transcription factor identi... 28 6.0
At2g05530.1 68415.m00585 glycine-rich protein 28 6.0
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 28 6.0
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 28 6.0
At1g22420.1 68414.m02803 hydroxyproline-rich glycoprotein family... 28 6.0
At5g60850.1 68418.m07633 Dof-type zinc finger domain-containing ... 28 7.9
At5g54920.1 68418.m06840 expressed protein 28 7.9
At5g52470.1 68418.m06510 fibrillarin 1 (FBR1) (FIB1) (SKIP7) ide... 28 7.9
At5g26742.1 68418.m03161 DEAD box RNA helicase (RH3) nearly iden... 28 7.9
At3g54920.1 68416.m06086 pectate lyase, putative / powdery milde... 28 7.9
At3g53460.1 68416.m05900 29 kDa ribonucleoprotein, chloroplast /... 28 7.9
At3g20190.1 68416.m02559 leucine-rich repeat transmembrane prote... 28 7.9
At3g08790.1 68416.m01021 VHS domain-containing protein / GAT dom... 28 7.9
At2g19000.1 68415.m02217 expressed protein 28 7.9
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 28 7.9
At1g22530.1 68414.m02814 SEC14 cytosolic factor family protein /... 28 7.9
>At1g20790.1 68414.m02603 F-box family protein contains Pfam:PF00646
F-box domain
Length = 435
Score = 42.3 bits (95), Expect = 3e-04
Identities = 14/55 (25%), Positives = 33/55 (60%)
Frame = +2
Query: 584 EHTDIQSPVQVPLYKHVTFPVHKPIHINVPKPILVGVPQPYPVKIPVNKPVAVPV 748
EH + P+ +P+ + P+H +H+++P P+ + +P P + +P+ P+ +P+
Sbjct: 347 EHVHVLMPMPMPMPMPMPMPMHMHMHMHMPMPMAMPMPMPIAMAMPMPMPMPMPM 401
Score = 34.7 bits (76), Expect = 0.069
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +2
Query: 605 PVQVPLYKHVTFPVHKPIHINVPKPILVGVPQPYPVKIPVNKPVAVPVETE 757
P+ +P+ H+ +H P+ + +P P+ + + P P+ +P+ P+ ETE
Sbjct: 360 PMPMPMPMHMHMHMHMPMPMAMPMPMPIAMAMPMPMPMPMPMPM-TKTETE 409
>At1g15840.1 68414.m01901 expressed protein
Length = 126
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/73 (38%), Positives = 32/73 (43%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 256
G EGG +G E G GG GG SGG GH L GGG D ++ G L
Sbjct: 40 GGEGGGGEGTSG-EGGGGGGDGTKGGGDGISGG-GHGDGLGCSGGGGDGTKGGGRRGDGL 97
Query: 257 GPQIFGHGAPSGG 295
G + G G GG
Sbjct: 98 GRGL-GRGGGRGG 109
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/66 (33%), Positives = 27/66 (40%)
Frame = +2
Query: 110 GDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQIFGHGAPS 289
G G GG N GG GG+G EGGG + + + GG G + G G
Sbjct: 15 GGGDGTKGGGNTITGG----GGEGKKKNGGGEGGGGEGTSGEGGGGGGDGTKGGGDGISG 70
Query: 290 GGDFGG 307
GG G
Sbjct: 71 GGHGDG 76
>At2g05440.2 68415.m00575 glycine-rich protein
Length = 154
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSE 229
G GG G GH GG ++ GG + GG GH GGGH +E
Sbjct: 101 GHYGGGGGHYGGGGGGHGGGGHYGGGGGGYGGGGGH-----HGGGGHGLNE 146
Score = 37.1 bits (82), Expect = 0.013
Identities = 30/89 (33%), Positives = 36/89 (40%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 256
G+ GG+ G GH GG +GG +GG GH + GGGH GGH
Sbjct: 42 GYGGGH-----GGHGGHGGGGGHGHGGH--NGGGGHGLDGYGGGGGH----YGGGGGHYG 90
Query: 257 GPQIFGHGAPSGGDFGGDTYLQAAHDSGH 343
G GH GG +GG GH
Sbjct: 91 GGG--GHYGGGGGHYGGGGGHYGGGGGGH 117
Score = 35.1 bits (77), Expect = 0.052
Identities = 27/76 (35%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 86 GGYSNEVAGDEQGH--NGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLG 259
GG+ + G GH GG ++ GG + GG GH GGGH GGH G
Sbjct: 68 GGHGLDGYGGGGGHYGGGGGHYGGGGGHYGGGGGHYGG----GGGHYGGGG---GGHGGG 120
Query: 260 PQIFGHGAPSGGDFGG 307
GH GG +GG
Sbjct: 121 ----GHYGGGGGGYGG 132
Score = 31.5 bits (68), Expect = 0.64
Identities = 24/76 (31%), Positives = 29/76 (38%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 256
G+ GG + G GG ++ GG + GG GH GGGH GG
Sbjct: 74 GYGGGGGHYGGGGGHYGGGGGHYGGGGGHYGGGGGH---YGGGGGGHGGGGHYGGGGGGY 130
Query: 257 GPQIFGHGAPSGGDFG 304
G G G GG G
Sbjct: 131 GG---GGGHHGGGGHG 143
>At2g05440.1 68415.m00574 glycine-rich protein
Length = 127
Score = 36.7 bits (81), Expect = 0.017
Identities = 28/77 (36%), Positives = 34/77 (44%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 256
G+ GG+ G GH GG +GG +GG GH + GGGH GGH
Sbjct: 42 GYGGGH-----GGHGGHGGGGGHGHGGH--NGGGGHGLDGYGGGGGH----YGGGGGHYG 90
Query: 257 GPQIFGHGAPSGGDFGG 307
G GH GG +GG
Sbjct: 91 GGG--GHYGGGGGGYGG 105
Score = 31.1 bits (67), Expect = 0.85
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSE 229
G+ GG + G GG ++ GG + GG GH GGGH +E
Sbjct: 74 GYGGGGGHYGGGGGHYGGGGGHYGGGGGGYGGGGGH-----HGGGGHGLNE 119
>At5g40490.1 68418.m04910 RNA recognition motif (RRM)-containing
protein ribonucleoprotein, Xenopus laevis, PIR:S40778;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 423
Score = 35.9 bits (79), Expect = 0.030
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Frame = +2
Query: 89 GYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTI--ALTQEGGGHDFSEAQALGGHNLGP 262
GYS G G+N G GG + GG G + + GGG+ GG+
Sbjct: 294 GYSGRYGGGGGGYNRGGYSMGGGGGYGGGPGDMYGGSYGEPGGGYGGPSGSYGGGYG-SS 352
Query: 263 QIFGHGAPSGGDFGGDTYLQAAHDSG 340
I G+G GG GG +D G
Sbjct: 353 GIGGYGGGMGGAGGGGYRGGGGYDMG 378
Score = 33.5 bits (73), Expect = 0.16
Identities = 25/74 (33%), Positives = 29/74 (39%)
Frame = +2
Query: 86 GGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQ 265
GGYS G G+ GG YGG G G+ GGG+ S GG G
Sbjct: 309 GGYS---MGGGGGYGGGPGDMYGGSYGEPGGGYGGPSGSYGGGYGSSGIGGYGGGMGGAG 365
Query: 266 IFGHGAPSGGDFGG 307
G+ G D GG
Sbjct: 366 GGGYRGGGGYDMGG 379
Score = 32.3 bits (70), Expect = 0.37
Identities = 25/77 (32%), Positives = 32/77 (41%)
Frame = +2
Query: 86 GGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQ 265
GGY +G G+ GG+ YGG + GG G + G+ GG+N G
Sbjct: 255 GGYGGGRSGGYGGY-GGEFGGYGGGGYGGGVGPYRG--EPALGYSGRYGGGGGGYNRGGY 311
Query: 266 IFGHGAPSGGDFGGDTY 316
G G GG GD Y
Sbjct: 312 SMGGGGGYGGG-PGDMY 327
Score = 31.9 bits (69), Expect = 0.48
Identities = 25/77 (32%), Positives = 31/77 (40%)
Frame = +2
Query: 86 GGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQ 265
GG E G G +G YG GG G + GGG+ +GG G
Sbjct: 328 GGSYGEPGGGYGGPSGSYGGGYGSSGI-GGYGGGMG-GAGGGGYRGGGGYDMGGVG-GGG 384
Query: 266 IFGHGAPSGGDFGGDTY 316
G+GA GG+ GG Y
Sbjct: 385 AGGYGAGGGGNGGGSFY 401
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/84 (30%), Positives = 35/84 (41%)
Frame = +2
Query: 56 AVATCKAGFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQ 235
+V T F SN G G+ GG YGG GG + GGG+ +
Sbjct: 213 SVTTPSKRFGDSRSNFGGGYGDGYGGGHGGGYGG---PGGP------YKSGGGYGGGRSG 263
Query: 236 ALGGHNLGPQIFGHGAPSGGDFGG 307
GG+ G + G+G GG +GG
Sbjct: 264 GYGGY--GGEFGGYG---GGGYGG 282
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +2
Query: 86 GGYSNEVAG-DEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLG 259
GGY + G G+ GG + GG G G+ GGG + GG+ G
Sbjct: 355 GGYGGGMGGAGGGGYRGGGGYDMGGVGGGGAGGYGAGGGGNGGGSFYGGGGGRGGYGGG 413
>At4g15460.1 68417.m02363 glycine-rich protein
Length = 148
Score = 35.9 bits (79), Expect = 0.030
Identities = 25/69 (36%), Positives = 31/69 (44%)
Frame = +2
Query: 89 GYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQI 268
G ++ G GG + + GG SGG GH + EGGGH GGH G +
Sbjct: 54 GGAHASVGGGHASGGGGHASVGGGHASGGGGHAV----EGGGH---AGGGGGGH--GEEE 104
Query: 269 FGHGAPSGG 295
GHG GG
Sbjct: 105 GGHGIGRGG 113
Score = 34.7 bits (76), Expect = 0.069
Identities = 30/89 (33%), Positives = 35/89 (39%), Gaps = 2/89 (2%)
Frame = +2
Query: 35 IFICLLLAVATCKAGFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGG 214
+ I LLL T GG G GG + + GG SGG GH GGG
Sbjct: 22 LIITLLLVNCTTVVAKGGGGGAHGGGGVHVSVGGAHASVGGGHASGGGGH----ASVGGG 77
Query: 215 H-DFSEAQAL-GGHNLGPQIFGHGAPSGG 295
H A+ GG + G GHG GG
Sbjct: 78 HASGGGGHAVEGGGHAGGGGGGHGEEEGG 106
>At2g21660.2 68415.m02578 glycine-rich RNA-binding protein (GRP7)
SP|Q03250 Glycine-rich RNA-binding protein 7
{Arabidopsis thaliana}
Length = 159
Score = 35.9 bits (79), Expect = 0.030
Identities = 23/67 (34%), Positives = 31/67 (46%)
Frame = +2
Query: 107 AGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQIFGHGAP 286
+G GH GG ++ GG GG G++ GGG +S GG G + G G
Sbjct: 89 SGGGGGHRGGGSYGGGGGRREGGGGYS------GGGGGYSSRGGGGGSYGGGRREGGGGY 142
Query: 287 SGGDFGG 307
GG+ GG
Sbjct: 143 GGGEGGG 149
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/74 (32%), Positives = 30/74 (40%)
Frame = +2
Query: 86 GGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQ 265
GG G G GG+ GG +SGG G ++ GGG + + GG G
Sbjct: 90 GGGGGHRGGGSYGGGGGRR--EGGGGYSGGGGG--YSSRGGGGGSYGGGRREGGGGYGG- 144
Query: 266 IFGHGAPSGGDFGG 307
G G GG GG
Sbjct: 145 --GEGGGYGGSGGG 156
>At1g26520.1 68414.m03232 cobalamin synthesis/P47K family protein
similar to dopamine-responsive protein [Homo sapiens]
GI:13177623; contains Pfam profile PF02492: Cobalamin
synthesis protein/P47K
Length = 301
Score = 35.5 bits (78), Expect = 0.039
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 231 LKLWVV-IIWDLRSLDMAHPAVETLAVTRTFKQHTIQDTNWVKAIS 365
++LW+ I+WD +S + L++ + + H +QDTNW+K S
Sbjct: 253 VRLWLEEILWDKKSEMDVYRCKAVLSIQNSDQMHILQDTNWMKKFS 298
>At5g46730.1 68418.m05757 glycine-rich protein
Length = 290
Score = 35.1 bits (77), Expect = 0.052
Identities = 27/89 (30%), Positives = 33/89 (37%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 256
G GGY AG G GG + GG + G H G G+ E G
Sbjct: 107 GGGGGYGG-AAGGHAGGGGGGSGGGGGSAYGAGGEHA-----SGYGNGAGEGGGAGASGY 160
Query: 257 GPQIFGHGAPSGGDFGGDTYLQAAHDSGH 343
G +G G GG GG + A SG+
Sbjct: 161 GGGAYGGGGGHGGGGGGGSAGGAHGGSGY 189
Score = 35.1 bits (77), Expect = 0.052
Identities = 27/89 (30%), Positives = 34/89 (38%)
Frame = +2
Query: 74 AGFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHN 253
+G+ GG AG H G + GG SGG G GGG+ + GG+
Sbjct: 187 SGYGGGEGGG-AGGGGSHGGAGGYGGGGGGGSGGGGAYGGGGAHGGGYGSGGGEG-GGYG 244
Query: 254 LGPQIFGHGAPSGGDFGGDTYLQAAHDSG 340
G G+G GG GG H G
Sbjct: 245 -GGAAGGYGGGGGGGEGGGGSYGGEHGGG 272
Score = 32.3 bits (70), Expect = 0.37
Identities = 21/78 (26%), Positives = 28/78 (35%)
Frame = +2
Query: 74 AGFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHN 253
+G+ G G+ GG + GG GG G + G G+ E GG
Sbjct: 143 SGYGNGAGEGGGAGASGYGGGA-YGGGGGHGGGGGGGSAGGAHGGSGYGGGEGGGAGGGG 201
Query: 254 LGPQIFGHGAPSGGDFGG 307
G+G GG GG
Sbjct: 202 SHGGAGGYGGGGGGGSGG 219
Score = 31.9 bits (69), Expect = 0.48
Identities = 30/90 (33%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 256
G GG +G GH GG A ++ G G EGGG + A GGH
Sbjct: 71 GGYGGAEGYASGGGSGHGGGGGGAASSGGYASGAG-------EGGGGGY--GGAAGGHAG 121
Query: 257 GPQIFGHGAPSGGDFGGDTY-LQAAHDSGH 343
G G G GG GG Y H SG+
Sbjct: 122 G----GGGGSGGG--GGSAYGAGGEHASGY 145
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/74 (31%), Positives = 29/74 (39%)
Frame = +2
Query: 86 GGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQ 265
GGY E G G+ GG GG + G +G+ GGG G + G
Sbjct: 51 GGYGGESGG---GYGGGSGEGAGG-GYGGAEGYA-----SGGGSGHGGGGG-GAASSGGY 100
Query: 266 IFGHGAPSGGDFGG 307
G G GG +GG
Sbjct: 101 ASGAGEGGGGGYGG 114
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = +2
Query: 74 AGFEGGYSNEVA-GDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGH 250
+G G Y A G G GG+ YGG +GG G GGG + GG
Sbjct: 217 SGGGGAYGGGGAHGGGYGSGGGEGGGYGG-GAAGGYGG-------GGGGGEGGGGSYGGE 268
Query: 251 NLGPQIFGHGAPSGGDFGG 307
+ G GHG G GG
Sbjct: 269 HGGGSGGGHGGGGGHGGGG 287
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +2
Query: 167 SGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQIFGHGAPSGGDFGGDTYLQAAHDSGH 343
SGG GH GGG + GG + G G G +GG +GG + SGH
Sbjct: 34 SGGGGHG-----GGGGSGGVSSGGYGGESGGGYGGGSGEGAGGGYGGAEGYASGGGSGH 87
>At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin
family protein similar to arabinogalactan protein
[Daucus carota] GI:11322245; contains Pfam profile
PF01190: Pollen proteins Ole e I family
Length = 359
Score = 34.7 bits (76), Expect = 0.069
Identities = 21/55 (38%), Positives = 25/55 (45%)
Frame = +2
Query: 605 PVQVPLYKHVTFPVHKPIHINVPKPILVGVPQPYPVKIPVNKPVAVPVETEISIP 769
PV+ P+Y PV P V P V P PVK PV P PV+ +S P
Sbjct: 159 PVKPPVYPPTKAPVKPPTKPPVKPP--VSPPAKPPVKPPVYPPTKAPVKPPVSPP 211
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 587 HTDIQSPVQVPLYKHVTFPVHKPIHINVPKPILVGVPQPY--PVKIPVNKPVAVPVETEI 760
H +SPV+ P+ V+ P P+ V P V P PVK PV+ P PV+ +
Sbjct: 65 HPPAKSPVKPPVKAPVSPPAKPPVKPPVYPPTKAPVKPPTKPPVKPPVSPPAKPPVKPPV 124
Query: 761 SIP 769
P
Sbjct: 125 YPP 127
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/55 (36%), Positives = 23/55 (41%)
Frame = +2
Query: 605 PVQVPLYKHVTFPVHKPIHINVPKPILVGVPQPYPVKIPVNKPVAVPVETEISIP 769
PV+ P+Y PV P V P V P PVK PV P PV+ P
Sbjct: 87 PVKPPVYPPTKAPVKPPTKPPVKPP--VSPPAKPPVKPPVYPPTKAPVKPPTKPP 139
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +2
Query: 599 QSPVQVPLYKHVTFPVHKPIHINVPKPILVGVPQPYPVKIPVNKPVAVPVETEISIP 769
++PV+ P V PV P V P+ P PVK PV+ P PV + P
Sbjct: 169 KAPVKPPTKPPVKPPVSPPAKPPVKPPVYP--PTKAPVKPPVSPPTKPPVTPPVYPP 223
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 6/61 (9%)
Frame = +2
Query: 605 PVQVPLYKHVTFPVHKPIHINVPKPIL------VGVPQPYPVKIPVNKPVAVPVETEISI 766
PV+ P+Y PV P V P+ V P PVK PV P PV+
Sbjct: 119 PVKPPVYPPTKAPVKPPTKPPVKPPVYPPTKAPVKPPTKPPVKPPVYPPTKAPVKPPTKP 178
Query: 767 P 769
P
Sbjct: 179 P 179
>At5g59170.1 68418.m07416 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 288
Score = 34.3 bits (75), Expect = 0.091
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 183 CPWPPEK-SWPPYAKF*PPLWPCSSPATSLEYPPSNP 76
CP PPE WPP K+ PP+ S P +YPP++P
Sbjct: 254 CPPPPEHYPWPPKKKYPPPVEYPSPPYK--KYPPADP 288
>At2g05510.1 68415.m00583 glycine-rich protein
Length = 127
Score = 34.3 bits (75), Expect = 0.091
Identities = 31/93 (33%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Frame = +2
Query: 47 LLLAVATCKAGFEGGY---SNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGH 217
+LL V+ A + G +E +G++GG +GG GG GH GGGH
Sbjct: 14 ILLVVSEVSAARQSGMVKPESEATVQPEGYHGG----HGGH---GGGGH-----YGGGGH 61
Query: 218 DFSEAQALGGHNLGPQIFGHGAPSGGDFGGDTY 316
GGH L GHG GG GG Y
Sbjct: 62 GHGGHNGGGGHGLDGYGGGHGGHYGG--GGGHY 92
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSE 229
G+ GG+ G GH GG +GG GG GH GGGH +E
Sbjct: 76 GYGGGHGGHYGGG-GGHYGGGG-GHGGGGHYGGGGH-----HGGGGHGLNE 119
>At4g39260.1 68417.m05557 glycine-rich RNA-binding protein 8 (GRP8)
(CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8
(CCR1 protein) (GRP8) {Arabidopsis thaliana} isoform
contains a non-consensus CG acceptor splice site at
intron 2
Length = 169
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +2
Query: 71 KAGFEGGYSNEVAGDEQGHNGG----QNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQA 238
++G GGYS G G GG ++ YG GG+G+ +EGGG+ + +
Sbjct: 102 RSGGGGGYSGGGGGGYSGGGGGGYERRSGGYGSGGGGGGRGYGGGGRREGGGYGGGDGGS 161
Query: 239 LGG 247
GG
Sbjct: 162 YGG 164
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = +2
Query: 110 GDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQIFGHGAPS 289
G +G +GG + GG +SGG G + GG S GG G G G
Sbjct: 91 GGGRGGSGGGYRSGGGGGYSGGGGGGYSGGGGGGYERRSGGYGSGGGGGGRGYGGGGRRE 150
Query: 290 GGDFGG 307
GG +GG
Sbjct: 151 GGGYGG 156
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/80 (31%), Positives = 29/80 (36%), Gaps = 3/80 (3%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEG---GGHDFSEAQALGG 247
G GG G G GG + GG +SGG G G GG GG
Sbjct: 89 GGGGGRGGSGGGYRSGGGGGYSGG-GGGGYSGGGGGGYERRSGGYGSGGGGGGRGYGGGG 147
Query: 248 HNLGPQIFGHGAPSGGDFGG 307
G G+G GG +GG
Sbjct: 148 RREGG---GYGGGDGGSYGG 164
>At2g21660.1 68415.m02577 glycine-rich RNA-binding protein (GRP7)
SP|Q03250 Glycine-rich RNA-binding protein 7
{Arabidopsis thaliana}
Length = 176
Score = 33.9 bits (74), Expect = 0.12
Identities = 27/79 (34%), Positives = 35/79 (44%)
Frame = +2
Query: 71 KAGFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGH 250
++G GGYS G G GG+ GG +SGG G ++ GGG + + GG
Sbjct: 104 RSGGGGGYSG--GGGSYGGGGGRR--EGGGGYSGGGGG--YSSRGGGGGSYGGGRREGGG 157
Query: 251 NLGPQIFGHGAPSGGDFGG 307
G G G GG GG
Sbjct: 158 GYGG---GEGGGYGGSGGG 173
Score = 32.3 bits (70), Expect = 0.37
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +2
Query: 74 AGFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTI-ALTQEGGGHDFSEAQALGGH 250
+G GG+ G + GG ++ GG + GG G GGG +S GG
Sbjct: 89 SGGGGGHRGGGGGGYRSGGGG-GYSGGGGSYGGGGGRREGGGGYSGGGGGYSSRGGGGGS 147
Query: 251 NLGPQIFGHGAPSGGDFGG 307
G + G G GG+ GG
Sbjct: 148 YGGGRREGGGGYGGGEGGG 166
>At2g05520.1 68415.m00584 glycine-rich protein (GRP) identical to
glycine-rich protein; atGRP (GI:259447) [Arabidopsis
thaliana]
Length = 145
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/68 (32%), Positives = 26/68 (38%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 256
G++GG N G GG N+ GG + GG G Q GGG GG
Sbjct: 56 GYQGGGGNYQGGGGNYQGGGGNYQGGGGRYQGGGGR----YQGGGGRYQGGGGRQGGGGS 111
Query: 257 GPQIFGHG 280
G HG
Sbjct: 112 GGSYCRHG 119
>At3g22330.1 68416.m02820 DEAD box RNA helicase, putative similar to
RNA helicases GI:3775995, GI:3775987 from [Arabidopsis
thaliana]; contains Pfam profiles PF00270: DEAD/DEAH box
helicase, PF00271: Helicase conserved C-terminal domain
Length = 616
Score = 33.5 bits (73), Expect = 0.16
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +2
Query: 86 GGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQ 265
GGY G G +GG + Y G G G + EG G D S +Q+ G + G
Sbjct: 516 GGYGGSSGGYGGGRSGGSSNRYSGDSDRSGFGSFGMRSPEGYGSDRS-SQSGGRSSFGGG 574
Query: 266 IFG---HGAPSG-GDFGGDTYLQA 325
G + SG GDFG D Q+
Sbjct: 575 RSGGSSNNRSSGFGDFGSDRSSQS 598
>At1g02710.1 68414.m00222 glycine-rich protein
Length = 96
Score = 32.7 bits (71), Expect = 0.28
Identities = 23/77 (29%), Positives = 32/77 (41%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 256
G G +S + G+ G GQ GG + GG+G + GGG S+ GG
Sbjct: 20 GLFGTHSLQAGGNGGGSGKGQWLHGGGGEGGGGEGGG---GEGGGGQKISKGGGGGGSGG 76
Query: 257 GPQIFGHGAPSGGDFGG 307
G + G GG+ G
Sbjct: 77 GQRSSSGGGGGGGEGDG 93
>At5g07520.1 68418.m00861 glycine-rich protein (GRP18) Oleosin;
glycine-rich protein 18 (GRP18) PMID:11431566;
Length = 228
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +2
Query: 131 GGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQIFGHGAPSGGDFGGD 310
GG +GG+ FSG G+ + GGG+ F + LGP G GAP G GG+
Sbjct: 107 GGYGGFWGGKKFSGTFGN-----KPGGGNPFGDISKW----LGPGAAGGGAPGGLGGGGN 157
Query: 311 TY 316
+
Sbjct: 158 PF 159
>At5g66400.1 68418.m08374 dehydrin (RAB18) nearly identical to
SP|P30185 Dehydrin Rab18 {Arabidopsis thaliana}
Length = 186
Score = 31.9 bits (69), Expect = 0.48
Identities = 27/80 (33%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
Frame = +2
Query: 86 GGYSNEVAGDEQGHNGGQNFAYGGQDF-SGGQGHTIALTQEGGGHDFSEAQALGGHNLGP 262
GGY G G GGQ + GGQ + SGGQG+ GG + G G
Sbjct: 34 GGYGTGGGG---GATGGQGYGTGGQGYGSGGQGYGT------GGQGYGTGTGTEGFGTGG 84
Query: 263 QIFGHG-----APSGGDFGG 307
HG SGG GG
Sbjct: 85 GARHHGQEQLHKESGGGLGG 104
>At5g61030.1 68418.m07659 RNA-binding protein, putative similar to
RNA-binding protein from [Solanum tuberosum]
GI:15822705, [Nicotiana tabacum] GI:15822703, [Nicotiana
sylvestris] GI:624925; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 309
Score = 31.9 bits (69), Expect = 0.48
Identities = 27/83 (32%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = +2
Query: 65 TCKAGFEGG-YSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQAL 241
T GF GG Y G G +GG GG SGG G GG+ +
Sbjct: 120 TSGGGFGGGGYGG--GGGGYGGSGGYGGGAGGYGGSGGYG------GGAGGYGGNSGGGY 171
Query: 242 GGHNLGPQIFGHGAPSGGDFGGD 310
GG+ G G+G G +GGD
Sbjct: 172 GGNAAG----GYGGSGAGGYGGD 190
Score = 31.5 bits (68), Expect = 0.64
Identities = 26/90 (28%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 256
G GGY G G+ G YGG G G GGG+ S G+
Sbjct: 158 GGAGGYGGNSGG---GYGGNAAGGYGGSGAGGYGGDATGHGGAGGGYGSSGGFGSSGNTY 214
Query: 257 GPQIFGHGAPSG--GDFGGDTYLQAAHDSG 340
G G A +G GD+ G + +A+ G
Sbjct: 215 GE---GSSASAGAVGDYNGSSGYGSANTYG 241
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 256
G+ G + GD GH GG YG G G+T EG + A A+G +N
Sbjct: 178 GYGGSGAGGYGGDATGH-GGAGGGYGSSGGFGSSGNTYG---EGSS---ASAGAVGDYN- 229
Query: 257 GPQIFG----HGAPSGGDFGGDT 313
G +G +G+ +GG F GD+
Sbjct: 230 GSSGYGSANTYGSSNGG-FAGDS 251
>At4g30460.1 68417.m04325 glycine-rich protein
Length = 162
Score = 31.9 bits (69), Expect = 0.48
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGH-NGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHN 253
G G + AG G +GG++ + G+ GG GH GGG + GG +
Sbjct: 89 GDAGSEAGSYAGSHAGSGSGGRSGSGRGRGSGGGGGH-------GGGGGGGGGRGGGGGS 141
Query: 254 LGPQIFGHGAPSGGDFGG 307
+ +G G GG +GG
Sbjct: 142 GNGEGYGEGGGYGGGYGG 159
>At1g74230.1 68414.m08597 glycine-rich RNA-binding protein similar
to RNA-binding protein GB:S46286 from [Nicotiana
sylvestris]
Length = 289
Score = 31.9 bits (69), Expect = 0.48
Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +2
Query: 74 AGFEGGYS-NEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGH 250
AG GGY N G G GG N Y G GG G+ + GGG + A +GG
Sbjct: 159 AGGGGGYGGNSSYGGNAGGYGG-NPPYSGNAVGGGGGYG---SNFGGGGGYGVAGGVGGS 214
Query: 251 NLGPQIFGHGAPSGGDFGGDTYLQAAHDSGHQ 346
Q G +G D ++ +D+ HQ
Sbjct: 215 ENFAQ--GSSTNAGFDDKFESNQPLGNDTDHQ 244
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 31.5 bits (68), Expect = 0.64
Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +2
Query: 596 IQSP-VQVPLYKHVTFPVHKPIHINVPKPILVGVPQPYPVKIPVNKPVAVPVETEISIP 769
+QSP VQ P YK T PV P KP P P P PV P + P
Sbjct: 147 VQSPPVQPPTYKPPTSPVKPPTTTPPVKPPTTTPPVQPPTYNPPTTPVKPPTAPPVKPP 205
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +2
Query: 608 VQVPLYKHVTFPVHKPIHINVPKPILVGVPQPYPVKIPVNKPVAVPVETEISIP 769
VQ P YK T V P V P V P PV+ P KP PV+ + P
Sbjct: 119 VQPPTYKPPTPTVKPPTTSPVKPPTTPPVQSP-PVQPPTYKPPTSPVKPPTTTP 171
>At4g01985.1 68417.m00265 expressed protein
Length = 579
Score = 31.5 bits (68), Expect = 0.64
Identities = 27/80 (33%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALG---G 247
G GG S +G G GG A G GG G + GGG + A+G G
Sbjct: 395 GASGGASGGASGGASGGVGGAGGAGGSVGAGGGVGGGVG-GGVGGGVGGAVGGAVGGAVG 453
Query: 248 HNLGPQIFGHGAPSGGDFGG 307
G + G G SGG GG
Sbjct: 454 GGGGGSVGGGGRGSGGAGGG 473
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/78 (30%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALG-GHN 253
G GG + G G GG GG+ G G GGG S G G
Sbjct: 139 GIGGGAGGAIGGGASGGVGGGGKGRGGKSGGGAGGGVGGGVGAGGGAGGSVGAGGGIGSG 198
Query: 254 LGPQIFGHGAPSGGDFGG 307
G + G SGG GG
Sbjct: 199 GGGTVGAGGRGSGGASGG 216
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/77 (31%), Positives = 27/77 (35%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 256
G GG G G GG + GG+ G G T GGG +GG
Sbjct: 438 GGVGGAVGGAVGGAVGGGGGGSVGGGGRGSGGAGGGTGGSVGAGGGVGVGGGGGIGGGAG 497
Query: 257 GPQIFGHGAPSGGDFGG 307
G G G GG GG
Sbjct: 498 G----GVGGGVGGGVGG 510
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/77 (28%), Positives = 25/77 (32%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 256
G GG G G GG + GG+ G G G G +GG
Sbjct: 288 GSVGGAVGGAVGGAVGGGGGGSVGGGGRGSGGASGGASGGASGGAGGSVGAGGGVGGGVG 347
Query: 257 GPQIFGHGAPSGGDFGG 307
G G G GG GG
Sbjct: 348 GGVGGGVGGGVGGAVGG 364
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/77 (32%), Positives = 30/77 (38%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 256
G GG V G +G GG A GG G+G A G G GG N+
Sbjct: 499 GVGGGVGGGVGGGVRGAVGG---AVGGGVGGAGRGSGGASGGAGAGGGAGGGVG-GGANV 554
Query: 257 GPQIFGHGAPSGGDFGG 307
G + G+ GG GG
Sbjct: 555 GVGVGAGGSTGGGAAGG 571
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/74 (31%), Positives = 27/74 (36%)
Frame = +2
Query: 86 GGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQ 265
GG + A G GG + GG GG+G G G + LGG G
Sbjct: 223 GGRGSGGASGGVGVGGGAGGSGGGSVGGGGRGSGGVGASGGAGGNVGAGGGLGGGVGGGV 282
Query: 266 IFGHGAPSGGDFGG 307
G G GG GG
Sbjct: 283 GGGVGGSVGGAVGG 296
>At3g28780.1 68416.m03592 glycine-rich protein similar to H41 gene
for histone protein GB:X15142 GI:3204 [Physarum
polycephalum]
Length = 614
Score = 31.5 bits (68), Expect = 0.64
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +2
Query: 86 GGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQ 265
GG S E A GG++ + G SGG T + GG E+ + G + G
Sbjct: 301 GGESGEAASGGSAETGGESASAGAA--SGGSAETGGESGSGGAASGGESASGGATSGGSP 358
Query: 266 IFGHGAPSGGD 298
G A +GG+
Sbjct: 359 ETGGSAETGGE 369
Score = 30.3 bits (65), Expect = 1.5
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Frame = +2
Query: 62 ATCKAGFEGGYSNEVAGDEQ--GHNGGQNFAYGGQDFSGG--QGHTIALTQEGGGHDFSE 229
AT E G S E G+ G G A GG SG G GG + S+
Sbjct: 352 ATSGGSPETGGSAETGGESASGGAASGGESASGGAASSGSVESGGESTGATSGGSAETSD 411
Query: 230 AQALGGHNLGPQIFGHGAPSGG--DFGGDT 313
A GG G + GA SGG + GG++
Sbjct: 412 ESASGGAASGGESASGGAASGGSAETGGES 441
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/92 (25%), Positives = 32/92 (34%)
Frame = +2
Query: 65 TCKAGFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALG 244
+ + G E G +G E G + GG +GG T + GG E+ A G
Sbjct: 329 SAETGGESGSGGAASGGESASGGATS---GGSPETGGSAETGGESASGGAASGGES-ASG 384
Query: 245 GHNLGPQIFGHGAPSGGDFGGDTYLQAAHDSG 340
G + G +G GG SG
Sbjct: 385 GAASSGSVESGGESTGATSGGSAETSDESASG 416
>At2g17870.1 68415.m02070 cold-shock DNA-binding family protein
contains Pfam domains, PF00313: 'Cold-shock' DNA-binding
domain and PF00098: Zinc knuckle
Length = 301
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +2
Query: 80 FEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLG 259
F G +A D G +GG++F GG SGG+G GH + + GG N G
Sbjct: 97 FNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCGDV--GHFARDCRQSGGGNSG 154
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +2
Query: 89 GYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLG 259
G +A D +G +GG + GG SGG G + G GH + + GG N+G
Sbjct: 167 GEVGHLAKDCRGGSGGNRYGGGGGRGSGGDGCYMC---GGVGHFARDCRQNGGGNVG 220
>At1g48410.2 68414.m05409 argonaute protein (AGO1) identical to
SP|O04379 Argonaute protein (AGO1) {Arabidopsis
thaliana}; contains Pfam profiles PF02171: Piwi domain,
PF02170: PAZ domain
Length = 1050
Score = 31.5 bits (68), Expect = 0.64
Identities = 28/87 (32%), Positives = 34/87 (39%), Gaps = 10/87 (11%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQN--FAYGGQDFSGGQGHTIALTQEG-GGHDFSEAQALGG 247
G EG S E G G Q F GG GG+G+T Q G GG + +
Sbjct: 13 GGEGSGSREAGPVSGGGRGSQRGGFQQGGGQHQGGRGYTPQPQQGGRGGRGYGQPPQQQQ 72
Query: 248 HNLGPQIF---GHGAP----SGGDFGG 307
GPQ + G G P G +GG
Sbjct: 73 QYGGPQEYQGRGRGGPPHQGGRGGYGG 99
>At1g48410.1 68414.m05408 argonaute protein (AGO1) identical to
SP|O04379 Argonaute protein (AGO1) {Arabidopsis
thaliana}; contains Pfam profiles PF02171: Piwi domain,
PF02170: PAZ domain
Length = 1048
Score = 31.5 bits (68), Expect = 0.64
Identities = 28/87 (32%), Positives = 34/87 (39%), Gaps = 10/87 (11%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQN--FAYGGQDFSGGQGHTIALTQEG-GGHDFSEAQALGG 247
G EG S E G G Q F GG GG+G+T Q G GG + +
Sbjct: 13 GGEGSGSREAGPVSGGGRGSQRGGFQQGGGQHQGGRGYTPQPQQGGRGGRGYGQPPQQQQ 72
Query: 248 HNLGPQIF---GHGAP----SGGDFGG 307
GPQ + G G P G +GG
Sbjct: 73 QYGGPQEYQGRGRGGPPHQGGRGGYGG 99
>At1g27710.1 68414.m03387 glycine-rich protein
Length = 212
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Frame = +2
Query: 89 GYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALG--GHNLGP 262
G+ E+ G GG + GG GG G + GGG + LG G N G
Sbjct: 97 GFKGELTAGGYG-GGGPGYGGGGYGPGGGGGGVVIGGGFGGGAGYGSGGGLGWDGGNGGG 155
Query: 263 QIFGHGAPSGGDFGG 307
G+G+ GG GG
Sbjct: 156 GP-GYGSGGGGIGGG 169
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/78 (32%), Positives = 27/78 (34%)
Frame = +2
Query: 74 AGFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHN 253
AG GG G G GG G F GG G+ GGG + GG
Sbjct: 104 AGGYGGGGPGYGGGGYGPGGGGGGVVIGGGFGGGAGY-----GSGGGLGWDGGNGGGGPG 158
Query: 254 LGPQIFGHGAPSGGDFGG 307
G G G GG GG
Sbjct: 159 YGSG--GGGIGGGGGIGG 174
>At5g19090.1 68418.m02269 heavy-metal-associated domain-containing
protein contains Pfam heavy-metal-associated domain
PF00403; glycine-rich protein GRP22, rape, PIR:S31415;
isoform contains a non-consensus TG-acceptor splice site
at intron 3
Length = 587
Score = 30.3 bits (65), Expect = 1.5
Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = +2
Query: 71 KAGFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGG- 247
K G GG + QG GG+N GG+ GG GH + GGG + + GG
Sbjct: 322 KKGGPGGGGGNMGNQNQG-GGGKN---GGK---GGGGHPLDGKMGGGGGGPNGNKGGGGV 374
Query: 248 -HNLGPQIFGHGAPSGGDFGG 307
N GP G GG GG
Sbjct: 375 QMNGGPNGGKKGGGGGGGGGG 395
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +2
Query: 122 GHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQI-FGHGAPSGGD 298
G GG GG GG G+ Q GGG + + GGH L ++ G G P+G
Sbjct: 314 GGGGGPGGKKGGP--GGGGGNMGNQNQGGGGKNGGKGG--GGHPLDGKMGGGGGGPNGNK 369
Query: 299 FGGDTYLQAAHDSG 340
GG + + G
Sbjct: 370 GGGGVQMNGGPNGG 383
>At5g07540.1 68418.m00863 glycine-rich protein (GRP16) oleosin;
glycine-rich protein 16 (GRP16) PMID:11431566
Length = 244
Score = 30.3 bits (65), Expect = 1.5
Identities = 26/81 (32%), Positives = 30/81 (37%), Gaps = 4/81 (4%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNF----AYGGQDFSGGQGHTIALTQEGGGHDFSEAQALG 244
G GG S + G+ G G A GG D GG GG + A G
Sbjct: 110 GASGGASGDKPGEMSGAGGPSGDKPGGASGGGDKPGGASGGGPGGASGGASGGASGGASG 169
Query: 245 GHNLGPQIFGHGAPSGGDFGG 307
G + G G G SGG GG
Sbjct: 170 GASGGASGGGPGGASGGGPGG 190
>At3g60320.1 68416.m06742 expressed protein contains Pfam profiles:
PF04782: protein of unknown function (DUF632), PF04783:
protein of unknown function (DUF630)
Length = 796
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/47 (44%), Positives = 25/47 (53%)
Frame = -2
Query: 174 PPEKSWPPYAKF*PPLWPCSSPATSLEYPPSNPALQVATASSKQMNI 34
PP S AKF PP + SPA S YPPS + ASSKQ ++
Sbjct: 76 PPPLSEQSPAKFVPPRF-SPSPAPSSVYPPST---SPSVASSKQPSV 118
>At2g28670.1 68415.m03485 disease resistance-responsive family
protein / fibroin-related contains similarity to silk
fibroin heavy chain [Bombyx mori] gi|765323|gb|AAB31861;
contains disease resistance response protien domain
Pfam:FP03018
Length = 447
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/54 (38%), Positives = 23/54 (42%)
Frame = +2
Query: 146 AYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQIFGHGAPSGGDFGG 307
A G GG G AL GGG A GG GP + G GA +G GG
Sbjct: 147 AGAGPALGGGAGAGPAL---GGGAGAGSALGGGGAGAGPALGGGGAGAGPALGG 197
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/70 (34%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Frame = +2
Query: 107 AGDEQGHNGGQNFAYGGQDFSG---GQGHTIALTQEGGGHDFSEAQALGGHNLGPQIFGH 277
AG G G A GG +G G G GGG A GG GP + G
Sbjct: 139 AGSALGGGAGAGPALGGGAGAGPALGGGAGAGSALGGGGAGAGPALGGGGAGAGPALGGG 198
Query: 278 GAPSGGDFGG 307
A SG GG
Sbjct: 199 VAGSGSALGG 208
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Frame = +2
Query: 47 LLLAVATCKAGFEGGYSNEVAGDEQGHNGGQNFAYGGQ--DFSGGQGHTIALTQEGGGHD 220
L L+ + G Y V GD+QGH ++ G+ F G T +E H+
Sbjct: 255 LSLSSSDYSVGSSINYGGSVKGDKQGHQSFNIYSNQGKMSSFDGSNSDTSDSLEERLSHE 314
Query: 221 FSEAQALGGHNLGP 262
++ H L P
Sbjct: 315 GLRNNSITNHGLPP 328
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Frame = +2
Query: 47 LLLAVATCKAGFEGGYSNEVAGDEQGHNGGQNFAYGGQ--DFSGGQGHTIALTQEGGGHD 220
L L+ + G Y V GD+QGH ++ G+ F G T +E H+
Sbjct: 255 LSLSSSDYSVGSSINYGGSVKGDKQGHQSFNIYSNQGKMSSFDGSNSDTSDSLEERLSHE 314
Query: 221 FSEAQALGGHNLGP 262
++ H L P
Sbjct: 315 GLRNNSITNHGLPP 328
>At4g38680.1 68417.m05477 cold-shock DNA-binding family protein
contains Pfam domains PF00313: 'Cold-shock' DNA-binding
domain and PF00098: Zinc knuckle
Length = 203
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +2
Query: 71 KAGFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSE-AQALGG 247
+ GF GG G G+ GG YGG+ GG+G + GH + ++ GG
Sbjct: 94 RGGFGGGRGGG-RGSGGGYGGGGG-GYGGRG-GGGRGGSDCYKCGEPGHMARDCSEGGGG 150
Query: 248 HNLGPQIFGHGAPSGGDFGG 307
+ G +G G GG GG
Sbjct: 151 YGGGGGGYGGGGGYGGGGGG 170
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/92 (31%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDF--SGGQGHTIALTQEGGG-HDFSEAQALGG 247
G GGY G G GG GG D G GH EGGG + GG
Sbjct: 106 GSGGGYGGG-GGGYGGRGGGGR---GGSDCYKCGEPGHMARDCSEGGGGYGGGGGGYGGG 161
Query: 248 HNLGPQIFGHGAPSGGDFGGDTYLQAAHDSGH 343
G G+G G GG + +SGH
Sbjct: 162 GGYGGGGGGYGGGGRGGGGGGGSCYSCGESGH 193
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -2
Query: 180 PWPPEKSWPPYAKF*PPLWPCSSPATSLEYPPSNPALQVATASSKQMN 37
P PP S PP PP P SP + PP P + A+S N
Sbjct: 788 PPPPVHSPPPPVHSPPPPSPIYSPPPPVFSPPPKPVTPLPPATSPMAN 835
>At2g21060.1 68415.m02500 cold-shock DNA-binding family protein /
glycine-rich protein (GRP2) identical to Glycine-rich
protein 2b (AtGRP2b) [Arabidopsis thaliana]
SWISS-PROT:Q38896; contains Pfam domains PF00313:
'Cold-shock' DNA-binding domain and PF00098: Zinc
knuckle
Length = 201
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQ-ALGGHN 253
G GG + G GG+ GG + GG G + + GGG D S + GH
Sbjct: 88 GNSGGGGSSGGRGGFGGGGGRGGGRGGGSYGGGYGGRGSGGRGGGGGDNSCFKCGEPGHM 147
Query: 254 LGPQIFGHGAPSGGDFGG 307
G G SGG GG
Sbjct: 148 ARECSQGGGGYSGGGGGG 165
>At1g77030.1 68414.m08970 glycine-rich protein
Length = 349
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +2
Query: 116 EQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQIFG-HGAPSG 292
++G GG+ A GG+ G + GGG DF + GG + G G G S
Sbjct: 203 KRGGRGGRGGARGGRGGGARGGRGGSRDFGGGGRDFGSSSDRGGRSGGRDFGGRRGGAST 262
Query: 293 GDFGG 307
GG
Sbjct: 263 SSRGG 267
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/79 (29%), Positives = 28/79 (35%)
Frame = +2
Query: 71 KAGFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGH 250
+ G G G G G ++F GG+DF G + GG DF GG
Sbjct: 207 RGGRGGARGGRGGGARGGRGGSRDFGGGGRDF----GSSSDRGGRSGGRDF------GGR 256
Query: 251 NLGPQIFGHGAPSGGDFGG 307
G G GG GG
Sbjct: 257 RGGASTSSRGGKRGGGRGG 275
>At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 250
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 449 HRDRPHHQRTRLHHHRGRNPLDRQNCDRRNRLDP 348
H HH+R +HHH R+ D CD R P
Sbjct: 31 HHSHHHHRRHGVHHHNQRH--DSDGCDPLRRPTP 62
>At1g31750.1 68414.m03895 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 176
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Frame = +2
Query: 164 FSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQ----IFGHGAPSGGDFGGDTYLQAAH 331
F GG G IA G + A A+GGH+ G GHG G FGG Y + H
Sbjct: 82 FGGGVGGLIA------GAATAAAAAMGGHHAGHHGGYGHHGHGKYKRGFFGGGKYKRGKH 135
>At3g06130.1 68416.m00704 heavy-metal-associated domain-containing
protein contains Pfam heavy metal associated domain
PF00403
Length = 473
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 256
G +GG N+ G G NGG G++ GG G GGG + + G +
Sbjct: 277 GAKGGPGNQNQGG--GKNGGGGHPQDGKNGGGGGGPNAGKKGNGGGGPMAGGVSGGFRPM 334
Query: 257 ---GPQIFGHGAPSGGDFG 304
GPQ P GG G
Sbjct: 335 GGGGPQ--NMSMPMGGQMG 351
>At5g04290.1 68418.m00422 KOW domain-containing transcription factor
family protein
Length = 1493
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/88 (28%), Positives = 37/88 (42%)
Frame = +2
Query: 77 GFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNL 256
G + SN + +Q +GG + ++G QD GG G + +GGG Q GG
Sbjct: 1267 GKQNETSNGSSWGKQNDSGGGS-SWGKQD-GGGGGSSWGKQNDGGGGSSWGKQGDGGSKP 1324
Query: 257 GPQIFGHGAPSGGDFGGDTYLQAAHDSG 340
+ G G G GG + + SG
Sbjct: 1325 WNEHSGGGRGFGERRGGGGFRGGRNQSG 1352
>At2g40610.1 68415.m05009 expansin, putative (EXP8) similar to
expansin 2 GI:7025493 from [Zinnia elegans];
alpha-expansin gene family, PMID:11641069
Length = 253
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = +2
Query: 110 GDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQIFGHGAPS 289
GD+ G GG YGG+D SG G G G+ + + L +F +G
Sbjct: 25 GDDGGWQGGHATFYGGEDASGTMGGAC-----GYGNLYGQGYGTNTAALSTALFNNGLTC 79
Query: 290 G 292
G
Sbjct: 80 G 80
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 677 PILVGVPQPYPVKIPVNKPVAVPVETEISIP 769
P+ V P P P P PVA P +T+ P
Sbjct: 53 PVPVNEPTPAPTTSPTTSPVASPPQTDAPAP 83
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/87 (31%), Positives = 32/87 (36%), Gaps = 5/87 (5%)
Frame = -2
Query: 309 SPPKSPPLGAPCPKI*GPRL*XXXXXXXXXXXXXXSCVKAIVCPWPPEKSWPPYAKF*PP 130
SPP PP+ +P P + P P PP KS PP + PP
Sbjct: 615 SPPPPPPVHSPPPPVFSP----PPPVHSPPPPVYSPPPPVYSPPPPPVKSPPPPPVYSPP 670
Query: 129 LWP--CSSPATSLEY---PPSNPALQV 64
L P SSP T PP P+ V
Sbjct: 671 LLPPKMSSPPTQTPVNSPPPRTPSQTV 697
>At3g22310.1 68416.m02818 DEAD box RNA helicase, putative (RH9)
similar to RNA helicases GI:3775995, GI:3775987
[Arabidopsis thaliana]; contains Pfam profiles PF00270:
DEAD/DEAH box helicase, PF00271: Helicase conserved
C-terminal domain
Length = 610
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/79 (26%), Positives = 30/79 (37%)
Frame = +2
Query: 74 AGFEGGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHN 253
+G GG S G G +GG +YGG S + ++ + G F + GG
Sbjct: 527 SGRSGGGSYGGYGGSSGRSGGGGGSYGGSGGSSSR-YSGGSDRSSGFGSFGSGGSSGGFG 585
Query: 254 LGPQIFGHGAPSGGDFGGD 310
G S G FG +
Sbjct: 586 SDRSSQSSGRSSFGGFGSN 604
>At3g04640.1 68416.m00497 glycine-rich protein predicted proteins,
Arabidopsis thaliana
Length = 159
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/77 (32%), Positives = 29/77 (37%)
Frame = +2
Query: 110 GDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQIFGHGAPS 289
G G GG F GG+ F GG + GGG S GG G G G
Sbjct: 73 GGGGGGRGGGGFGGGGRSFGGG-----GSSSRGGGGSSSRG---GG---GSSSRGGGLRP 121
Query: 290 GGDFGGDTYLQAAHDSG 340
+GG T+ H SG
Sbjct: 122 IPIYGGGTHRSGHHSSG 138
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 186 VCPWPPEKSWPPYAKF*PPLWPCSSPATSLEYPPSNPA 73
V P PP PP + PP+ P P + + YPP P+
Sbjct: 608 VTPSPP----PPSPLYYPPVTPSPPPPSPVYYPPVTPS 641
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 186 VCPWPPEKSWPPYAKF*PPLWPCSSPATSLEYPPSNPA 73
V P PP PP + PP+ P P + + YPP P+
Sbjct: 623 VTPSPP----PPSPVYYPPVTPSPPPPSPVYYPPVTPS 656
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 25.4 bits (53), Expect(2) = 5.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 174 PPEKSWPPYAKF*PPLWPCSSPATSLEYPP 85
PP + PP A PP P S P + PP
Sbjct: 126 PPTPASPPPAPASPPPAPASPPPAPVSPPP 155
Score = 21.4 bits (43), Expect(2) = 5.5
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2
Query: 306 PPKSPPLGAP 277
PP+SPP AP
Sbjct: 100 PPQSPPASAP 109
>At5g28640.1 68418.m03503 SSXT protein-related / glycine-rich
protein contains weak hit to Pfam profile PF05030: SSXT
protein (N-terminal region)
Length = 210
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +2
Query: 134 GQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQIFGHGAPSGGDFGGDT 313
G + + GG G G I + GG HDF + G G + G G S GD G
Sbjct: 148 GMSSSSGG---GGSSGLHILQGEAGGFHDFGRGKPEMGSGGGGE--GRGG-SSGDGGETL 201
Query: 314 YLQAAHD 334
YL+++ D
Sbjct: 202 YLKSSDD 208
>At2g24570.1 68415.m02934 WRKY family transcription factor identical
to WRKY transcription factor 17 GI:15991743 from
[Arabidopsis thaliana]
Length = 321
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 641 PVHKPIHINVPKPILVGVPQPYPVKIP 721
PVH P +VP P+ V P P + P
Sbjct: 76 PVHSPPSSSVPPPVKVTTPAPTQISAP 102
>At2g05530.1 68415.m00585 glycine-rich protein
Length = 115
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +2
Query: 41 ICLLLAVATCKAGFEGGYSNEVAGDEQ--GHNGGQNFAYGGQDFSGGQGHTIALTQEGGG 214
+ L++ +G S E +Q G +GG GG ++GG GH GGG
Sbjct: 14 VLLVVTEVAAASGTVKSESGETVQPDQYNGGHGGNGGYNGGGGYNGGGGHNGGGYNGGGG 73
Query: 215 HD 220
++
Sbjct: 74 YN 75
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 179 GHTIALTQEGGGHDFSEAQALGGHNLGPQIFGHGAPSGGDF-GGDTYLQAAHDSGH 343
G T+ Q GGH + GG+N G G G +GG + GG Y H H
Sbjct: 33 GETVQPDQYNGGHGGN-----GGYNGGGGYNGGGGHNGGGYNGGGGYNGGGHGGRH 83
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 884
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = -2
Query: 180 PWPPEKSWPPYAKF*PPLWPCSSPATSLEYPPSNPALQVATASSKQ 43
P PP W P + P P SSPA YPP P + Q
Sbjct: 62 PPPPPPQWGPPSPHYPQGQPYSSPA----YPPHQPPFNAGANGNSQ 103
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 897
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = -2
Query: 180 PWPPEKSWPPYAKF*PPLWPCSSPATSLEYPPSNPALQVATASSKQ 43
P PP W P + P P SSPA YPP P + Q
Sbjct: 62 PPPPPPQWGPPSPHYPQGQPYSSPA----YPPHQPPFNAGANGNSQ 103
>At1g22420.1 68414.m02803 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 480
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -2
Query: 177 WP-PEKSWPPYAKF*PPLWPCSSPATSLEYPP-SNPALQVATASS 49
WP P+ + P PPL P +SP+ SL++P N QV SS
Sbjct: 331 WPNPQNNLQPENV--PPLVPATSPSMSLDFPNFQNTPPQVLVTSS 373
>At5g60850.1 68418.m07633 Dof-type zinc finger domain-containing
protein similar to zinc finger protein OBP4 gi:5059396
from [Arabidopsis thaliana]; EMBL:AF155817
Length = 307
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 215 HDFSEAQALGGHNLGPQIFGHGAPSGGDFGGDTYLQA 325
HDFS GG G + FG G GG GGD ++A
Sbjct: 5 HDFSMNGVGGGGGGGGRFFGGGIGGGG--GGDRRMRA 39
>At5g54920.1 68418.m06840 expressed protein
Length = 517
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +2
Query: 602 SPVQVPLYKHVTF-PVHKPIHINVPKPILVGVPQPYPVKIPVNKPV---AVPVETEISIP 769
+P Q KH + +P+H+ P+P QPY V +P + PV P+ + IP
Sbjct: 448 TPQQFQYPKHQSLIATGQPMHLYAPQPFAANGHQPYTV-MPTDIPVMQSPFPINRAMPIP 506
>At5g52470.1 68418.m06510 fibrillarin 1 (FBR1) (FIB1) (SKIP7)
identical to fibrillarin 1 GI:9965653 from [Arabidopsis
thaliana]; C-terminus identical to SKP1 interacting
partner 7 GI:10716959 from [Arabidopsis thaliana];
contains Pfam domain PF01269: Fibrillarin
Length = 308
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = +2
Query: 122 GHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQIFGHGAPSG 292
G GG F GG+D GG+G GGG F ++ GP+ G GAP G
Sbjct: 7 GGRGGGGFR-GGRD-GGGRGF-------GGGRSFGGGRSGDRGRSGPRGRGRGAPRG 54
>At5g26742.1 68418.m03161 DEAD box RNA helicase (RH3) nearly
identical to RNA helicase [Arabidopsis thaliana]
GI:3775987; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain, PF00098: Zinc knuckle
Length = 747
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Frame = +2
Query: 110 GDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQIFG----- 274
G +G GG+ + G+D GG + GGG +S + + + G
Sbjct: 655 GGSRGSRGGRGGSSRGRDSWGGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSS 714
Query: 275 -HGAPSGGDFGGDTYLQAAHDSGHQ 346
APS FGG ++ SGH+
Sbjct: 715 SSRAPSRESFGGSCFI--CGKSGHR 737
>At3g54920.1 68416.m06086 pectate lyase, putative / powdery mildew
susceptibility protein (PMR6) identical to powdery
mildew susceptibility protein [Arabidopsis thaliana]
GI:22506901; similar to pectate lyase 2 GP:6606534 from
[Musa acuminata]
Length = 501
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = +2
Query: 113 DEQGHNGGQNFAYGGQDFSGGQGHTIA---LTQEGGGHDFSEAQALGGHNLGPQIFGHGA 283
D+QG +G YGG GG + + GG S + + N+ IFG A
Sbjct: 417 DDQGQSGNSYSPYGGDGGGGGSSGGSSGGGMDVMGGTTRGSSSSSGDDSNVFQMIFGSDA 476
Query: 284 PS 289
PS
Sbjct: 477 PS 478
>At3g53460.1 68416.m05900 29 kDa ribonucleoprotein, chloroplast /
RNA-binding protein cp 29 nearly identical to SP|Q43349
29 kDa ribonucleoprotein, chloroplast precursor
(RNA-binding protein cp29) {Arabidopsis thaliana}
Length = 342
Score = 27.9 bits (59), Expect = 7.9
Identities = 24/73 (32%), Positives = 32/73 (43%)
Frame = +2
Query: 86 GGYSNEVAGDEQGHNGGQNFAYGGQDFSGGQGHTIALTQEGGGHDFSEAQALGGHNLGPQ 265
GGY +E G GG YG + GG G ++ GGG+ +Q GG G Q
Sbjct: 192 GGYGSERGGGYGSERGG---GYGSER-GGGYG-----SERGGGYG---SQRSGGGYGGSQ 239
Query: 266 IFGHGAPSGGDFG 304
+G+ SG G
Sbjct: 240 RSSYGSGSGSGSG 252
>At3g20190.1 68416.m02559 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor kinase GB:AAA33715
[Petunia integrifolia]
Length = 679
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -2
Query: 135 PPLWPCSSPATSLEYPPSNPALQVATASSKQMNIFMFDLCVVGVG 1
PPL PCSS + S PS+P T +K + F+ + ++ +G
Sbjct: 250 PPLSPCSSDSGSSPDLPSSP-----TEKNKNQSFFIIAIVLIVIG 289
>At3g08790.1 68416.m01021 VHS domain-containing protein / GAT
domain-containing protein weak similarity to
HGF-regulated tyrosine kinase substrate [Mus musculus]
GI:1089781; contains Pfam profiles PF00790: VHS domain,
PF03127: GAT domain
Length = 607
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 135 PPLWPCSSPATSLEYPPSNP 76
PP W SP++S +Y P++P
Sbjct: 442 PPPWEAQSPSSSPQYSPTHP 461
>At2g19000.1 68415.m02217 expressed protein
Length = 125
Score = 27.9 bits (59), Expect = 7.9
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +2
Query: 20 KSNMKIFICLLLAVATCKAG---FEGGYSNEVAGDEQG-HNGGQNFAYGGQDFSGGQGHT 187
KS + F+ +++ V+ +A ++ G S E+ G + G H+G F+ G +GG G +
Sbjct: 4 KSILLPFLLVIIFVSASQASRQLWDSGIS-EMFGSKSGFHHGFSGFS-GSSGGAGGAGGS 61
Query: 188 IA-LTQEGGGHDFSEAQALGGHNL 256
+ GG H S A G L
Sbjct: 62 FGDMMNAGGAHTCSAQGACSGKKL 85
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 671 PKPILVGVPQPYPVKIPVNKPVAVPVETEISIP 769
P+P++ G+P PV P+ +P ++P T P
Sbjct: 170 PRPLIPGMPGLRPVMPPMVRPASLPFVTPAEKP 202
>At1g22530.1 68414.m02814 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to SEC14-like protein 2
(Alpha-tocopherol associated protein) (TAP) (bTAP)
(Fragment) (SP:P58875) {Bos taurus}
Length = 683
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 593 DIQSPV-QVPLYKHVTFPVHKPIHINVPKPILVGVPQPYPVKIPVNKPVAVPVETEIS 763
+IQ P VP+ K T K + + V V P P + V VAVP ETE++
Sbjct: 5 EIQKPTASVPVVKEETPAPVKEVEVPVTTEKAVAAPAPEATEEKVVSEVAVP-ETEVT 61
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,863,408
Number of Sequences: 28952
Number of extensions: 347905
Number of successful extensions: 1964
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 1291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1776
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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