Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0509
         (805 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   2.2  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   5.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.0  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   6.6  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +3

Query: 234 RFSSSQKLRRDILLLFNEIEIS*LHTKLSLRTAISRSALSVSLREIATPF 383
           RFS   K RR++L L  ++  +      +    ISRS     L  I T F
Sbjct: 298 RFSDESKKRRELLRLAQQVNANIAQITAANFFDISRSTFLGILATITTYF 347


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +1

Query: 49  FSSYPFCNFCGFDFYVIIRCYSFVVEVIRGHILGIFSFS 165
           + SY F N  G +FY       F +E  + ++L   +F+
Sbjct: 131 YMSYIFANIMGLEFY-----KQFAIEYFQMYVLFFVNFA 164


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +1

Query: 49  FSSYPFCNFCGFDFYVIIRCYSFVVEVIRGHILGIFSFS 165
           + SY F N  G +FY       F +E  + ++L   +F+
Sbjct: 131 YMSYIFANIMGLEFY-----KQFAIEYFQMYVLFFVNFA 164


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 12/54 (22%), Positives = 23/54 (42%)
 Frame = -1

Query: 802 YYYDYFAAEVSNKIINSTFTLELIMPSTKAYCKTENF*LMFRGELGAFTLMSMR 641
           Y+Y  F   +  + I+   TLE+       +  T    L   G + ++ L+ M+
Sbjct: 321 YFYWSFGFLIIQRFIHQIGTLEVAFTGKNFFSITRGLILSIAGAIVSYELVLMQ 374


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,539
Number of Sequences: 336
Number of extensions: 3405
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)