Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0509
         (805 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X75760-1|CAA53387.1|  428|Drosophila melanogaster LRR47 protein.       29   7.4  
AY058306-1|AAL13535.1|  428|Drosophila melanogaster GH06740p pro...    29   7.4  
AE014134-1912|AAF52970.1|  428|Drosophila melanogaster CG6098-PA...    29   7.4  
AE014297-3720|ABC66189.2| 1519|Drosophila melanogaster CG34027-P...    29   9.8  

>X75760-1|CAA53387.1|  428|Drosophila melanogaster LRR47 protein.
          Length = 428

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -1

Query: 298 LISISLNNNKMSRLSF*EEEKRYLRKM 218
           L+S++LNNN +SRL F     + LRK+
Sbjct: 252 LVSLNLNNNLLSRLPFAIRRMKALRKL 278


>AY058306-1|AAL13535.1|  428|Drosophila melanogaster GH06740p
           protein.
          Length = 428

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -1

Query: 298 LISISLNNNKMSRLSF*EEEKRYLRKM 218
           L+S++LNNN +SRL F     + LRK+
Sbjct: 252 LVSLNLNNNLLSRLPFAIRRMKALRKL 278


>AE014134-1912|AAF52970.1|  428|Drosophila melanogaster CG6098-PA
           protein.
          Length = 428

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -1

Query: 298 LISISLNNNKMSRLSF*EEEKRYLRKM 218
           L+S++LNNN +SRL F     + LRK+
Sbjct: 252 LVSLNLNNNLLSRLPFAIRRMKALRKL 278


>AE014297-3720|ABC66189.2| 1519|Drosophila melanogaster CG34027-PA
            protein.
          Length = 1519

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +2

Query: 671  LTSKHELEILRFTVGFC*WHYKLECEGTINYFVTYLRCE 787
            + +K  ++I   +  FC W  +  C G +  F+ Y  CE
Sbjct: 1115 VVAKRTMDIKCHSRCFCVWRCRCHCIGKLETFINYNACE 1153


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,167,797
Number of Sequences: 53049
Number of extensions: 576133
Number of successful extensions: 979
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)