Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0509
         (805 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g19030.1 68417.m02804 major intrinsic family protein / MIP fa...    29   4.8  
At3g10880.1 68416.m01310 hypothetical protein                          28   6.3  

>At4g19030.1 68417.m02804 major intrinsic family protein / MIP
           family protein contains Pfam profile: MIP PF00230;
           identical to cDNA NLM1 protein GI:2677613
          Length = 296

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +3

Query: 6   NNPSFIKKKEYLLIV**LPILQFLWIRFLCDYSMLFIRCGS 128
           +NP  +KK++ LL V  +P LQ L   FL  Y ++F  C S
Sbjct: 35  HNPRPLKKQDSLLSVS-VPFLQKLIAEFLGTYFLVFTGCAS 74


>At3g10880.1 68416.m01310 hypothetical protein
          Length = 278

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +1

Query: 307 TQSFLYVQPSLGQRYQFL*EKLPRHLDRIQIHCSLVS 417
           T+ FLY+  SLG+ Y  L ++L   L  +++ CSLV+
Sbjct: 10  TEKFLYLYQSLGETYNDLNQELLNGL--LKLPCSLVT 44


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,328,291
Number of Sequences: 28952
Number of extensions: 285124
Number of successful extensions: 472
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)