Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0508
         (578 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   3.3  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   3.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   5.7  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   7.6  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 252 PLEPWTAMDASSRPSFTST 196
           P E W  M A+  P+FTS+
Sbjct: 80  PGEKWKEMRATLSPAFTSS 98


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 174 ESVARNKECS*TRAVRMHPSPSKVQAATLPLM 269
           E+V R+K     RAV    SP+ ++   +PL+
Sbjct: 103 ETVVRDKAVESLRAVAQQHSPADLENHFVPLV 134


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 136 PGQIPVPISDQQRN 177
           PG IPVP  ++ RN
Sbjct: 242 PGAIPVPDKNRPRN 255


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 205 YEHSLFLATDSVAGLILVLVFVRENVSILRHN 110
           + +S+FL   +V  ++  L+F +E  S L  N
Sbjct: 21  FVNSIFLVMSAVTIILSSLIFNQEQWSSLNKN 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,606
Number of Sequences: 336
Number of extensions: 2680
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)