Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0508
         (578 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    28   0.19 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   1.8  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    24   3.1  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   7.2  
AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    23   9.5  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   9.5  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.5  

>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 28.3 bits (60), Expect = 0.19
 Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +2

Query: 236 VQGSSGYTAPDGTPIQITYTADA-NGY 313
           VQGS     PDGT   + YTAD  NG+
Sbjct: 49  VQGSYSVVDPDGTKRTVDYTADPHNGF 75


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +1

Query: 136 PGQIPVPISDQQRNQWPGTRSARKRGP*GCIHRRP 240
           PG +P P   QQ+    G  S    G  G IH  P
Sbjct: 120 PGLVPPPQQQQQQQAPLGIPSVAHGGGSGAIHASP 154


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +2

Query: 254 YTAPDGTPIQITYTADANGYQPSGAHLPTTPAPL 355
           +T  DG   +   T   NG Q +   LPT  A L
Sbjct: 360 FTELDGVTFETKMTKSFNGMQTASVKLPTKLATL 393


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 222 SSRPSFTSTPCSWPLIPLLV*YWYW 148
           SSR      P SW L+P     ++W
Sbjct: 530 SSRSQLMKLPSSWDLLPYFWFAFHW 554


>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP55 protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 209 RLRALLVPGH*FRCWSDIGTGICPGKR 129
           R+R   +P    RC  ++G G CP +R
Sbjct: 123 RMRCSPLPYLFNRCLMEVGIGNCPPER 149


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 176  FRCWSDIGTGICPGKRQHLATQ 111
            F C +D+  GICP   + L +Q
Sbjct: 1192 FYCHADVLIGICPYPAECLVSQ 1213


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 239 QGSSGYTAPDGTP 277
           +G  GYT P+G P
Sbjct: 292 KGDKGYTGPEGPP 304


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,644
Number of Sequences: 2352
Number of extensions: 12264
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)