Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0507
         (404 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   1.7  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    23   1.7  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    23   1.7  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    21   7.0  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    20   9.3  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    20   9.3  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 376 NLLWSQIIFIVPLITIF 326
           N  W+ I+ IVP +T+F
Sbjct: 186 NSWWALILVIVPCLTLF 202


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
 Frame = -1

Query: 377 KFIMESNYIYRTTNNNI----LIYNI 312
           K I  +NY Y+  NNN     L YNI
Sbjct: 302 KIISSNNYNYKNYNNNYNSKKLYYNI 327


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
 Frame = -1

Query: 377 KFIMESNYIYRTTNNNI----LIYNI 312
           K I  +NY Y+  NNN     L YNI
Sbjct: 313 KIISSNNYNYKNYNNNYNSKKLYYNI 338


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 368 MESNYIYRTTNNNILIYNISF 306
           + +N  Y   NN  L YNI++
Sbjct: 312 IHNNNNYNNYNNKKLYYNINY 332


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 118 LVCRKSKKKKTVRLFS*NESYI 183
           +V    KKK+ + LFS +ES I
Sbjct: 240 VVSGTQKKKRKIYLFSGHESNI 261


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 118 LVCRKSKKKKTVRLFS*NESYI 183
           +V    KKK+ + LFS +ES I
Sbjct: 255 VVSGTQKKKRKIYLFSGHESNI 276


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,327
Number of Sequences: 438
Number of extensions: 1637
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)