Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0506
         (737 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    23   2.6  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   3.4  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   4.5  

>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +1

Query: 478 IIFILQACSNLFNEIYINSWS 540
           I+ ++ AC+N+ +E Y N ++
Sbjct: 5   IVLVVCACTNVLSEEYTNQYN 25


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +3

Query: 630 CVITIQLGVSIGCDSHI 680
           CVI+ QL VS GC S I
Sbjct: 74  CVISRQLRVSHGCVSKI 90


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
 Frame = -1

Query: 329 LITKKY--DISADIKRKFPTAR 270
           ++ KK+  +I ADI R+FPT R
Sbjct: 5   VVQKKHITEIIADIYRQFPTDR 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,840
Number of Sequences: 336
Number of extensions: 3670
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)