Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0505
(711 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029104-1|AAH29104.1| 792|Homo sapiens CPT1C protein protein. 33 0.76
AF357970-2|AAL99615.1| 803|Homo sapiens carnitine palmitoyltran... 33 0.76
AF331918-1|AAQ14875.1| 803|Homo sapiens carnitine acyltransfera... 33 0.76
X67334-1|CAA47749.1| 892|Homo sapiens polypeptide BM28 protein. 31 5.4
D83987-1|BAA12177.1| 895|Homo sapiens huMCM2 protein. 31 5.4
D21063-1|BAA04642.1| 914|Homo sapiens KIAA0030 protein. 31 5.4
BT009734-1|AAP88736.1| 895|Homo sapiens MCM2 minichromosome mai... 31 5.4
BC017490-1|AAH17490.2| 904|Homo sapiens minichromosome maintena... 31 5.4
BC017258-1|AAH17258.2| 904|Homo sapiens minichromosome maintena... 31 5.4
BC014272-1|AAH14272.2| 904|Homo sapiens minichromosome maintena... 31 5.4
BC007938-1|AAH07938.2| 904|Homo sapiens minichromosome maintena... 31 5.4
BC007670-1|AAH07670.2| 904|Homo sapiens minichromosome maintena... 31 5.4
BC006165-1|AAH06165.3| 904|Homo sapiens minichromosome maintena... 31 5.4
AY675259-1|AAT70723.1| 904|Homo sapiens MCM2 minichromosome mai... 31 5.4
>BC029104-1|AAH29104.1| 792|Homo sapiens CPT1C protein protein.
Length = 792
Score = 33.5 bits (73), Expect = 0.76
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +2
Query: 137 RFPRDFRTGVFSASVLKFYFLFCAITL 217
RF DF TGVF AS L + FLF AI L
Sbjct: 45 RFWNDFLTGVFPASPLSWLFLFSAIQL 71
>AF357970-2|AAL99615.1| 803|Homo sapiens carnitine
palmitoyltransferase IC protein.
Length = 803
Score = 33.5 bits (73), Expect = 0.76
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +2
Query: 137 RFPRDFRTGVFSASVLKFYFLFCAITL 217
RF DF TGVF AS L + FLF AI L
Sbjct: 45 RFWNDFLTGVFPASPLSWLFLFSAIQL 71
>AF331918-1|AAQ14875.1| 803|Homo sapiens carnitine
acyltransferase-like protein 1 protein.
Length = 803
Score = 33.5 bits (73), Expect = 0.76
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +2
Query: 137 RFPRDFRTGVFSASVLKFYFLFCAITL 217
RF DF TGVF AS L + FLF AI L
Sbjct: 45 RFWNDFLTGVFPASPLSWLFLFSAIQL 71
>X67334-1|CAA47749.1| 892|Homo sapiens polypeptide BM28 protein.
Length = 892
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 409 SAVRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 537
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 3 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 45
>D83987-1|BAA12177.1| 895|Homo sapiens huMCM2 protein.
Length = 895
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 409 SAVRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 537
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 3 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 45
>D21063-1|BAA04642.1| 914|Homo sapiens KIAA0030 protein.
Length = 914
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 409 SAVRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 537
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 22 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 64
>BT009734-1|AAP88736.1| 895|Homo sapiens MCM2 minichromosome
maintenance deficient 2, mitotin (S. cerevisiae)
protein.
Length = 895
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 409 SAVRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 537
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 3 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 45
>BC017490-1|AAH17490.2| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 409 SAVRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 537
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 12 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
>BC017258-1|AAH17258.2| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 409 SAVRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 537
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 12 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
>BC014272-1|AAH14272.2| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 409 SAVRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 537
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 12 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
>BC007938-1|AAH07938.2| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 409 SAVRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 537
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 12 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
>BC007670-1|AAH07670.2| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 409 SAVRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 537
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 12 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
>BC006165-1|AAH06165.3| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 409 SAVRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 537
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 12 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
>AY675259-1|AAT70723.1| 904|Homo sapiens MCM2 minichromosome
maintenance deficient 2, mitotin (S. cerevisiae)
protein.
Length = 904
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 409 SAVRQRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 537
S+ QRR P + GR+ TDALT S GR + + D ++
Sbjct: 12 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,901,482
Number of Sequences: 237096
Number of extensions: 2361440
Number of successful extensions: 4923
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4920
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -