Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0503
         (391 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7PNF4 Cluster: ENSANGP00000007015; n=1; Anopheles gamb...    38   0.052
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    36   0.28 
UniRef50_UPI000023ED40 Cluster: hypothetical protein FG06467.1; ...    34   1.1  
UniRef50_Q029U3 Cluster: Cna B domain protein precursor; n=1; So...    33   2.6  
UniRef50_Q479Y5 Cluster: Peptidase C14, caspase catalytic subuni...    32   3.4  
UniRef50_UPI000023D891 Cluster: hypothetical protein FG08213.1; ...    32   4.5  
UniRef50_A5E4B9 Cluster: Putative uncharacterized protein; n=1; ...    31   6.0  
UniRef50_UPI0000E4692C Cluster: PREDICTED: hypothetical protein;...    31   7.9  
UniRef50_O42854 Cluster: SH3 domain-containing protein C23A1.17;...    31   7.9  

>UniRef50_Q7PNF4 Cluster: ENSANGP00000007015; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000007015 - Anopheles gambiae
           str. PEST
          Length = 660

 Score = 38.3 bits (85), Expect = 0.052
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -3

Query: 347 HSGAHRHLQRKCDISSKASSIVTTAAPPFKPKPITASR 234
           H  AH+H Q K    S  + I+  A PP  P P+TA R
Sbjct: 36  HKNAHKHTQNKFAFHSHETVILNIAVPPLPPPPLTAGR 73


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 35.9 bits (79), Expect = 0.28
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -3

Query: 224 AGWWYLPVRTYNRSYHQ 174
           A WWYLP RT+ RSYH+
Sbjct: 569 AEWWYLPARTHKRSYHR 585


>UniRef50_UPI000023ED40 Cluster: hypothetical protein FG06467.1;
           n=2; Gibberella zeae PH-1|Rep: hypothetical protein
           FG06467.1 - Gibberella zeae PH-1
          Length = 373

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 20/50 (40%), Positives = 28/50 (56%)
 Frame = +2

Query: 86  NKCSRLTSTVKE*HCVIKKQTRKIIICVIPGGRTCCKSARVGTTTLPISA 235
           NK  R T TVK    VIKK  RK+ + V+P  RT  ++ ++  TT+   A
Sbjct: 39  NKIPRATVTVKNQITVIKKVIRKVNVIVVPQPRTTTET-QISKTTVTTDA 87


>UniRef50_Q029U3 Cluster: Cna B domain protein precursor; n=1;
           Solibacter usitatus Ellin6076|Rep: Cna B domain protein
           precursor - Solibacter usitatus (strain Ellin6076)
          Length = 1077

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 297 GLKYSYNGCPTLQTETHYCFTAEIGRVVVPTRADLQQVLP 178
           GL++ YNG      +  Y F    G++VVP +  ++Q  P
Sbjct: 616 GLRWEYNGPAYALNDNQYSFDLATGKIVVPNQNSIKQFSP 655


>UniRef50_Q479Y5 Cluster: Peptidase C14, caspase catalytic subunit
           p20; n=1; Dechloromonas aromatica RCB|Rep: Peptidase
           C14, caspase catalytic subunit p20 - Dechloromonas
           aromatica (strain RCB)
          Length = 278

 Score = 32.3 bits (70), Expect = 3.4
 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
 Frame = -1

Query: 265 PSNRNPLLLHGRNRQGGGTYPCGLTTGPTTRNY---ANYNFAGLFFYYTMLFLHRGSQS* 95
           P+  +PLL   R  Q G     G   GP   +Y       F G F YY +  L    +  
Sbjct: 182 PAGSSPLLAAARTNQLGDLLLAGCKEGPNNFSYDAKIKGRFNGAFTYYALKALKNMKEGA 241

Query: 94  TFVEYIFH*KNWYPSGIRTPVHRL 23
           T+V++      + PS   + V +L
Sbjct: 242 TYVDWYKAIGKYLPSASYSQVPQL 265


>UniRef50_UPI000023D891 Cluster: hypothetical protein FG08213.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG08213.1 - Gibberella zeae PH-1
          Length = 373

 Score = 31.9 bits (69), Expect = 4.5
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = +2

Query: 86  NKCSRLTSTVKE*HCVIKKQTRKIIICVIPGGRTCCKSARVGTT 217
           NK  R T++++    VI+K TR++ + V+P  +T  +   V +T
Sbjct: 39  NKIPRATTSIQTKVTVIRKVTRRVTVIVVPKAKTTTQKVTVKST 82


>UniRef50_A5E4B9 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 1531

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = -2

Query: 180 PPGITQIIILRVCFFITQCYSFTVEVNREHLLSTYFIRKIGTRLGF 43
           PP +  + +L  C FI   + F V ++  + L  YF      +L F
Sbjct: 417 PPVLVPLALLNWCLFINSVHLFDVRISASYCLQAYFKNNQEAKLAF 462


>UniRef50_UPI0000E4692C Cluster: PREDICTED: hypothetical protein;
           n=4; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 320

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
 Frame = -1

Query: 280 QRLPHPSNRN----PLLLHGRNRQGG-GTYPCGLTTGPTTRNYANYNF 152
           QR P+P  +N    P   +G  +QGG G+YP     GP T + A Y +
Sbjct: 237 QRQPYPQQQNNMPPPTSQYGNPQQGGYGSYPGQGGQGPPTPHQARYGY 284


>UniRef50_O42854 Cluster: SH3 domain-containing protein C23A1.17; n=1;
            Schizosaccharomyces pombe|Rep: SH3 domain-containing
            protein C23A1.17 - Schizosaccharomyces pombe (Fission
            yeast)
          Length = 1611

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = -3

Query: 335  HRHLQRKCDISSKASSIVTTAAP---PFKPKPITASRQK*AGWW 213
            HRHL R    +SK  SIV+T  P    F  KP+     +   WW
Sbjct: 1335 HRHLSRSSSRASKKPSIVSTTGPFNESFSAKPVEPCASE--KWW 1376


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,864,060
Number of Sequences: 1657284
Number of extensions: 8409808
Number of successful extensions: 21808
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21796
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 16143318346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)