Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0503
         (391 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.35 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   5.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   5.7  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   5.7  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    20   7.5  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    20   7.5  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    20   7.5  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    20   7.5  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    20   7.5  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    20   7.5  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    20   7.5  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    20   7.5  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    20   7.5  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    20   7.5  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    20   7.5  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           20   7.5  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    20   7.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   10.0 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   10.0 

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.35
 Identities = 9/37 (24%), Positives = 21/37 (56%)
 Frame = -2

Query: 138 FITQCYSFTVEVNREHLLSTYFIRKIGTRLGFEHRCI 28
           F+T+   F V++  + L+  Y  +K G+++    +C+
Sbjct: 749 FMTKLLEFDVKLQSDRLMIDYKTQKTGSKIHLFVKCV 785


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -2

Query: 309 YKF*GLKYSYNGC 271
           Y F G  Y Y GC
Sbjct: 17  YPFQGTTYKYTGC 29


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 305 SSKASSIVTTAAPPFKPKP 249
           SS ASS   TAAP  +  P
Sbjct: 168 SSSASSPSVTAAPHLRDSP 186


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -2

Query: 264 LQTETHYCFTAEIGRVVVPTRADLQQV 184
           +QT+      + +G+  +PT  DLQ++
Sbjct: 18  IQTKVREEILSVVGKEKIPTYNDLQEL 44


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -2

Query: 201 ADLQQVLPPGIT 166
           AD+++V+ PG+T
Sbjct: 58  ADIERVIMPGVT 69


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 305 SSKASSIVTTAAPPFKPKPITASR 234
           S   S +  + +PP KP   TAS+
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQ 164


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 305 SSKASSIVTTAAPPFKPKPITASR 234
           S   S +  + +PP KP   TAS+
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQ 164


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = -3

Query: 218 WWYLP 204
           WWYLP
Sbjct: 276 WWYLP 280


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = -3

Query: 218 WWYLP 204
           WWYLP
Sbjct: 276 WWYLP 280


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = -3

Query: 218 WWYLP 204
           WWYLP
Sbjct: 276 WWYLP 280


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = -3

Query: 218 WWYLP 204
           WWYLP
Sbjct: 276 WWYLP 280


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = -3

Query: 218 WWYLP 204
           WWYLP
Sbjct: 276 WWYLP 280


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 305 SSKASSIVTTAAPPFKPKPITASR 234
           S   S +  + +PP KP   TAS+
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQ 164


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 305 SSKASSIVTTAAPPFKPKPITASR 234
           S   S +  + +PP KP   TAS+
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQ 164


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 305 SSKASSIVTTAAPPFKPKPITASR 234
           S   S +  + +PP KP   TAS+
Sbjct: 97  SGLTSPLSVSTSPPGKPATSTASQ 120


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 305 SSKASSIVTTAAPPFKPKPITASR 234
           S   S +  + +PP KP   TAS+
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQ 164


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 305 SSKASSIVTTAAPPFKPKPITASR 234
           S   S +  + +PP KP   TAS+
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQ 164


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 217 GGTYPCGLTTGPTTRNYANYNFAGLF 140
           GGT    ++T  +T  Y    F GLF
Sbjct: 294 GGTAIVSISTSVSTSVYLAIVFNGLF 319


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 88  QMFTIDFHGEGITLCNKKTNP 150
           Q+ TIDF       CN + NP
Sbjct: 335 QVQTIDFGRPATFTCNFEGNP 355


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,755
Number of Sequences: 336
Number of extensions: 2315
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8225022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)