Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0503
         (391 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   5.2  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    22   6.9  
AF045250-1|AAC02700.1|  259|Anopheles gambiae serine proteinase ...    22   6.9  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 11/47 (23%), Positives = 23/47 (48%)
 Frame = +1

Query: 34  PVFESQTGTNFSNEICTQQMFTIDFHGEGITLCNKKTNPQNYNLRNS 174
           PV+ +  G+  S+    Q   +   HG+ +    K++  +N + RN+
Sbjct: 624 PVYYANLGSRHSSYTSHQSRISYTSHGDLLGGMTKESRLRNRSARNT 670


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = +1

Query: 1   GRPVHTC*GDAPVFESQTGTN-FSNEICTQQMFTIDFHGEGITLCNKKTNPQ 153
           GR +H       ++ +  G   F N+  +   F+I+  G  + LC     PQ
Sbjct: 378 GRCLHANVPRGQIWNTHHGMGMFGNQTTSPDAFSINLAGVLLRLCQPLLKPQ 429


>AF045250-1|AAC02700.1|  259|Anopheles gambiae serine proteinase
          protein.
          Length = 259

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 50 WDSNTGASPQHVCTG 6
          W+ N G+  +H C+G
Sbjct: 41 WNFNNGSRARHFCSG 55


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 445,198
Number of Sequences: 2352
Number of extensions: 9559
Number of successful extensions: 59
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)