Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0501
(803 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC093746-1|AAH93746.2| 778|Homo sapiens PDZ domain containing R... 38 0.056
BC093744-1|AAH93744.1| 778|Homo sapiens PDZ domain containing R... 38 0.056
AK131554-1|BAD18688.1| 776|Homo sapiens protein ( Homo sapiens ... 38 0.056
AK123401-1|BAC85606.1| 193|Homo sapiens protein ( Homo sapiens ... 32 2.1
AB209221-1|BAD92458.1| 558|Homo sapiens Hypothetical protein FL... 32 2.1
AK172839-1|BAD18804.1| 473|Homo sapiens protein ( Homo sapiens ... 31 3.7
BT007367-1|AAP36031.1| 868|Homo sapiens programmed cell death 6... 31 4.9
BC068454-1|AAH68454.1| 873|Homo sapiens PDCD6IP protein protein. 31 4.9
BC025688-1|AAH25688.1| 377|Homo sapiens mucin 7, secreted protein. 31 4.9
BC020066-1|AAH20066.1| 868|Homo sapiens programmed cell death 6... 31 4.9
AK002122-1|BAA92092.1| 617|Homo sapiens protein ( Homo sapiens ... 31 4.9
AF349951-1|AAK20398.1| 868|Homo sapiens HP95 protein. 31 4.9
AF250394-1|AAQ14260.1| 868|Homo sapiens dopamine receptor inter... 31 4.9
AF151793-1|AAF08220.1| 868|Homo sapiens ALG-2 interacting prote... 31 4.9
AB037796-1|BAA92613.1| 546|Homo sapiens KIAA1375 protein protein. 31 4.9
AK130508-1|BAC85367.1| 121|Homo sapiens protein ( Homo sapiens ... 31 6.4
>BC093746-1|AAH93746.2| 778|Homo sapiens PDZ domain containing RING
finger 4 protein.
Length = 778
Score = 37.5 bits (83), Expect = 0.056
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +3
Query: 171 LVRTFEPEPAYPVETS-KYVERSTQADPADKHLSP-KQLRPPSKLILS-SEYLCTSSKHL 341
L RT PAY + + + + STQ D +H+ +LRPP+ + +L + S H
Sbjct: 53 LRRTPLSRPAYGMASEVQLMNASTQTDITFEHIMALAKLRPPTPPVPDICPFLLSDSCHS 112
Query: 342 SSHLEHAFISDFDYNNSRPSDQE 410
+EH F D +Y +S P+D +
Sbjct: 113 LHPMEHEFYEDNEYISSLPADAD 135
>BC093744-1|AAH93744.1| 778|Homo sapiens PDZ domain containing RING
finger 4 protein.
Length = 778
Score = 37.5 bits (83), Expect = 0.056
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +3
Query: 171 LVRTFEPEPAYPVETS-KYVERSTQADPADKHLSP-KQLRPPSKLILS-SEYLCTSSKHL 341
L RT PAY + + + + STQ D +H+ +LRPP+ + +L + S H
Sbjct: 53 LRRTPLSRPAYGMASEVQLMNASTQTDITFEHIMALAKLRPPTPPVPDICPFLLSDSCHS 112
Query: 342 SSHLEHAFISDFDYNNSRPSDQE 410
+EH F D +Y +S P+D +
Sbjct: 113 LHPMEHEFYEDNEYISSLPADAD 135
>AK131554-1|BAD18688.1| 776|Homo sapiens protein ( Homo sapiens
cDNA FLJ16796 fis, clone TBAES2008133, moderately
similar to Mus musculus semaF cytoplasmic domain
associated protein 3. ).
Length = 776
Score = 37.5 bits (83), Expect = 0.056
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +3
Query: 171 LVRTFEPEPAYPVETS-KYVERSTQADPADKHLSP-KQLRPPSKLILS-SEYLCTSSKHL 341
L RT PAY + + + + STQ D +H+ +LRPP+ + +L + S H
Sbjct: 51 LRRTPLSRPAYGMASEVQLMNASTQTDITFEHIMALAKLRPPTPPVPDICPFLLSDSCHS 110
Query: 342 SSHLEHAFISDFDYNNSRPSDQE 410
+EH F D +Y +S P+D +
Sbjct: 111 LHPMEHEFYEDNEYISSLPADAD 133
>AK123401-1|BAC85606.1| 193|Homo sapiens protein ( Homo sapiens
cDNA FLJ41407 fis, clone BRHIP2000819, moderately
similar to Human mRNA for actin binding protein p57. ).
Length = 193
Score = 32.3 bits (70), Expect = 2.1
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = -2
Query: 778 VGAGSGSK*APVWDDKRVVACSFRLQPARLPLWHFDQGLPE*QQVREEEWVNGPRKHGSQ 599
V AG+GS+ P W+ + V+ P R+ + LP + V W GP + +Q
Sbjct: 97 VSAGAGSRGPPGWEPRLEVSSLLCHSPGRMAM---GLSLPRREMVVPTGWSGGPSQVTAQ 153
Query: 598 SCRPSSG 578
PS G
Sbjct: 154 GRPPSQG 160
>AB209221-1|BAD92458.1| 558|Homo sapiens Hypothetical protein
FLJ41407 variant protein.
Length = 558
Score = 32.3 bits (70), Expect = 2.1
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = -2
Query: 778 VGAGSGSK*APVWDDKRVVACSFRLQPARLPLWHFDQGLPE*QQVREEEWVNGPRKHGSQ 599
V AG+GS+ P W+ + V+ P R+ + LP + V W GP + +Q
Sbjct: 309 VSAGAGSRGPPGWEPRLEVSSLLCHSPGRMAM---GLSLPRREMVVPTGWSGGPSQVTAQ 365
Query: 598 SCRPSSG 578
PS G
Sbjct: 366 GRPPSQG 372
>AK172839-1|BAD18804.1| 473|Homo sapiens protein ( Homo sapiens
cDNA FLJ24000 fis, clone KAIA1329, highly similar to
Homo sapiens cAMP responsive element binding protein
3-like 3 ).
Length = 473
Score = 31.5 bits (68), Expect = 3.7
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = -2
Query: 706 LQPARLPLWHFDQGLPE*QQVREEEWVNGPRKHGSQSCRPSSGRCKLCHQLQCKSTSPFS 527
L A L L + +GL QV +WV +H ++CR G + C Q + P
Sbjct: 376 LDNATLVLRNATEGLG---QVAPLDWVAPGPEHWLRTCRAGGGGRRACEPRQDYAPRPLC 432
Query: 526 PGLP 515
PG+P
Sbjct: 433 PGVP 436
>BT007367-1|AAP36031.1| 868|Homo sapiens programmed cell death 6
interacting protein protein.
Length = 868
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 196 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 312
PP+ Q+ AP P P QP +PQ PPQ SYYPQ
Sbjct: 834 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 867
>BC068454-1|AAH68454.1| 873|Homo sapiens PDCD6IP protein protein.
Length = 873
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 196 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 312
PP+ Q+ AP P P QP +PQ PPQ SYYPQ
Sbjct: 839 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 872
>BC025688-1|AAH25688.1| 377|Homo sapiens mucin 7, secreted protein.
Length = 377
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = +1
Query: 196 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPP 330
PP P T APP P P APP +S P+ T APP
Sbjct: 202 PPSSSAPPETTAAPPTP-------PATTPAPPSSSAPPETTAAPP 239
>BC020066-1|AAH20066.1| 868|Homo sapiens programmed cell death 6
interacting protein protein.
Length = 868
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 196 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 312
PP+ Q+ AP P P QP +PQ PPQ SYYPQ
Sbjct: 834 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 867
>AK002122-1|BAA92092.1| 617|Homo sapiens protein ( Homo sapiens
cDNA FLJ11260 fis, clone PLACE1009060, weakly similar to
BRO1 PROTEIN. ).
Length = 617
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 196 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 312
PP+ Q+ AP P P QP +PQ PPQ SYYPQ
Sbjct: 583 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 616
>AF349951-1|AAK20398.1| 868|Homo sapiens HP95 protein.
Length = 868
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 196 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 312
PP+ Q+ AP P P QP +PQ PPQ SYYPQ
Sbjct: 834 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 867
>AF250394-1|AAQ14260.1| 868|Homo sapiens dopamine receptor
interacting protein 4 protein.
Length = 868
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 196 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 312
PP+ Q+ AP P P QP +PQ PPQ SYYPQ
Sbjct: 834 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 867
>AF151793-1|AAF08220.1| 868|Homo sapiens ALG-2 interacting protein
1 protein.
Length = 868
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 196 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 312
PP+ Q+ AP P P QP +PQ PPQ SYYPQ
Sbjct: 834 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 867
>AB037796-1|BAA92613.1| 546|Homo sapiens KIAA1375 protein protein.
Length = 546
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 196 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 312
PP+ Q+ AP P P QP +PQ PPQ SYYPQ
Sbjct: 512 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 545
>AK130508-1|BAC85367.1| 121|Homo sapiens protein ( Homo sapiens
cDNA FLJ26998 fis, clone SLV04689. ).
Length = 121
Score = 30.7 bits (66), Expect = 6.4
Identities = 27/81 (33%), Positives = 32/81 (39%)
Frame = -2
Query: 769 GSGSK*APVWDDKRVVACSFRLQPARLPLWHFDQGLPE*QQVREEEWVNGPRKHGSQSCR 590
GSG++ P W C FRL P P QG + EEE P HG S
Sbjct: 41 GSGARAQPSW-----FLC-FRLSPGCCPGGR--QGCGLIRGSTEEECFQAPSGHGQNSFP 92
Query: 589 PSSGRCKLCHQLQCKSTSPFS 527
S G C + +S PFS
Sbjct: 93 CSCGTWVACSSMPHRSLLPFS 113
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.312 0.132 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,644,401
Number of Sequences: 237096
Number of extensions: 2884339
Number of successful extensions: 7380
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7343
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -