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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0496
         (754 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I5X9 Cluster: DNA-directed RNA polymerase; n=8; Plasm...    34   3.3  
UniRef50_Q5AHZ0 Cluster: Potential mitochondrial protein Fmp47; ...    34   4.3  
UniRef50_Q83DA1 Cluster: Conserved domain protein; n=4; Coxiella...    33   7.6  
UniRef50_A5KA11 Cluster: Putative uncharacterized protein; n=1; ...    33   7.6  
UniRef50_A0DJ74 Cluster: Chromosome undetermined scaffold_52, wh...    33   7.6  
UniRef50_A4Q3T7 Cluster: Terpene synthase-like; Terpenoid syntha...    33   10.0 

>UniRef50_Q8I5X9 Cluster: DNA-directed RNA polymerase; n=8;
           Plasmodium|Rep: DNA-directed RNA polymerase - Plasmodium
           falciparum (isolate 3D7)
          Length = 1450

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +3

Query: 42  NNKYNVDCKQYYSTNKYLIFTKISSYNF*DISHNSY-TLKRQLLETFVVLLLCSYETRVS 218
           NNK  +D K YY   +  +  ++ S  F D+    Y TLK+Q+ +T    +  +Y +++ 
Sbjct: 575 NNKNEIDDKDYYGNKRLELAGQLISLLFEDLYKRFYFTLKKQIDQTLSKYMQSNYNSKLR 634

Query: 219 NT 224
           +T
Sbjct: 635 ST 636


>UniRef50_Q5AHZ0 Cluster: Potential mitochondrial protein Fmp47; n=1;
            Candida albicans|Rep: Potential mitochondrial protein
            Fmp47 - Candida albicans (Yeast)
          Length = 1179

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = +3

Query: 78   STNKYLIFTKISSYNF*DISHNSYTLKRQLLETFVVL--LLCS 200
            S + Y+I  +I +Y F  +S  SYTLK Q+++T  +L  LLC+
Sbjct: 963  SKDIYMISLRIFNYGFTLVSQESYTLKTQIIKTLRLLLPLLCT 1005


>UniRef50_Q83DA1 Cluster: Conserved domain protein; n=4; Coxiella
           burnetii|Rep: Conserved domain protein - Coxiella
           burnetii
          Length = 494

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 16/60 (26%), Positives = 32/60 (53%)
 Frame = +3

Query: 24  HRQSLINNKYNVDCKQYYSTNKYLIFTKISSYNF*DISHNSYTLKRQLLETFVVLLLCSY 203
           H +SL  ++  V CK  +  N ++IF  I  +NF  I+   + L   L+  ++++ L ++
Sbjct: 259 HYKSLTFSEIMVQCKHIFHINYWIIFLAIGMWNFNSINPLQHFLMFFLIGIYILVFLVTF 318


>UniRef50_A5KA11 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 2591

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +2

Query: 494  SNTRRAHCGLGE-CVITINSYK-NSLHLCNIFKCDTRKYNGLHKAY 625
            +N   +  G GE C +  NSY  N+L L N +  + + YN LHK Y
Sbjct: 2291 NNDDNSDSGEGEGCALLANSYNSNALFLDNDYSVEKKIYNDLHKQY 2336


>UniRef50_A0DJ74 Cluster: Chromosome undetermined scaffold_52, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_52, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1841

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 51   YNVDCKQYYSTNKYLIFTKISSY 119
            YN +CK++ S  KY  FT ISSY
Sbjct: 999  YNFECKEFSSQLKYTFFTSISSY 1021


>UniRef50_A4Q3T7 Cluster: Terpene synthase-like; Terpenoid synthase;
           n=4; Medicago truncatula|Rep: Terpene synthase-like;
           Terpenoid synthase - Medicago truncatula (Barrel medic)
          Length = 557

 Score = 32.7 bits (71), Expect = 10.0
 Identities = 13/54 (24%), Positives = 26/54 (48%)
 Frame = +2

Query: 467 QWKQNWPIVSNTRRAHCGLGECVITINSYKNSLHLCNIFKCDTRKYNGLHKAYI 628
           +W  NWP + +     C L + ++T    +   H+C++  C  ++Y    +A I
Sbjct: 434 KWVSNWPKIVDAISTICRLMDEIVTSEFERKRGHVCSLLDCYMKQYGMSREAAI 487


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,126,002
Number of Sequences: 1657284
Number of extensions: 12559770
Number of successful extensions: 29201
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29153
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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