Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0496
         (754 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       26   0.37 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.6  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   3.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   3.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.6  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   8.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.0  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 663 PNIRIMRVLGHVIYALCNPLYLR-VSHLNILHKC 565
           P+ R+MR LG +  A C   +   V+HL+ +  C
Sbjct: 296 PSERVMRELGRIFRAYCRENHASWVNHLSNIEDC 329


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
 Frame = -3

Query: 527 HPSRSVHVACLKLWASFVSIAVFVPLTLLHSI-FFGLCLQ 411
           HPS       LK W   +   VFV   L H +    LC+Q
Sbjct: 576 HPSDKSAKPMLKPWQRVLPDGVFVAFLLKHIVPKLQLCMQ 615


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
 Frame = -2

Query: 318 NIVLSRLTHVNYGSYKVRCAICRTIRKETSNACY--SPLFRKSIIIRLQMSPATAFSMCN 145
           N+ L   T V+     V C  C    K+T + CY     F  +  +R ++         N
Sbjct: 280 NLCLVIYTLVSVSLVMVTCDACTIASKQTISWCYKLQEQFVTNSEVRTELFKLAQHVSAN 339

Query: 144 CYEICLRNY 118
              I   NY
Sbjct: 340 IVHITAGNY 348


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
 Frame = -2

Query: 318 NIVLSRLTHVNYGSYKVRCAICRTIRKETSNACY--SPLFRKSIIIRLQMSPATAFSMCN 145
           N+ L   T V+     V C  C    K+T + CY     F  +  +R ++         N
Sbjct: 280 NLCLVIYTLVSVSLVMVTCDACTIASKQTISWCYKLQEQFVTNSEVRTELFKLAQHVSAN 339

Query: 144 CYEICLRNY 118
              I   NY
Sbjct: 340 IVHITAGNY 348


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -2

Query: 273 KVRCAICRTIRKETSNAC 220
           K+  A+C++ RK+ S++C
Sbjct: 30  KLLDALCQSFRKQNSSSC 47


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = +3

Query: 42  NNKYNVDCKQYYSTNKYLIFTKISSYNF*DISHNSYTLKRQLLETFV 182
           ++ +  D +Q+Y T    IFT I       I  ++ T++     TF+
Sbjct: 59  SSSFEADLRQFYKTAYSAIFTVIDFSLCKAILVHAITIRSTFSWTFI 105


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = -2

Query: 87  YWCCSIVYNLHYIY 46
           ++C SI +N+H ++
Sbjct: 59  FYCVSITFNVHLLF 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,186
Number of Sequences: 336
Number of extensions: 4008
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)