Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0495
         (770 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4072|AAF56669.1|  463|Drosophila melanogaster CG6066-PA...   158   7e-39
AE014297-2349|AAF55416.1|  465|Drosophila melanogaster CG17283-P...    29   5.3  
M23221-1|AAA28540.1| 2038|Drosophila melanogaster fsh protein.         29   7.1  
BT001473-1|AAN71228.1| 1010|Drosophila melanogaster LD07709p pro...    29   9.3  
AE014135-156|AAF59399.3| 1010|Drosophila melanogaster CG32016-PC...    29   9.3  
AE014135-155|AAF59400.3| 1010|Drosophila melanogaster CG32016-PB...    29   9.3  
AE014135-154|AAF59398.3| 1002|Drosophila melanogaster CG32016-PA...    29   9.3  

>AE014297-4072|AAF56669.1|  463|Drosophila melanogaster CG6066-PA
           protein.
          Length = 463

 Score =  158 bits (384), Expect = 7e-39
 Identities = 79/143 (55%), Positives = 101/143 (70%)
 Frame = +3

Query: 237 EKGKEHEVQQAQSKLCKDNEELSSEIIGPEARAIGSGALSVREXXXXXXXXXXXXXXXFV 416
           EK K+     A     K++   + E +GP  R    G+L+ ++               ++
Sbjct: 316 EKSKKSSSSSASKSKNKESASHNDEDVGPSLRP--GGSLNQKDFGKALLPGEGAAMAAYI 373

Query: 417 ADGKRIPRRGEIGLTSDEIASYEAVGYVMSGSRHRRMEAVRIRKENQIYSADEKRALAAF 596
           A+GKRIPRRGEIGLTSDEIA++E+VGYVMSGSRHRRMEAVRIRKENQ+YSADEKRALA F
Sbjct: 374 AEGKRIPRRGEIGLTSDEIANFESVGYVMSGSRHRRMEAVRIRKENQLYSADEKRALAMF 433

Query: 597 SKDERNKRENAILSQFRDVLKAR 665
           SK+ER KREN ILSQF+D++ ++
Sbjct: 434 SKEERQKRENKILSQFKDMIHSK 456


>AE014297-2349|AAF55416.1|  465|Drosophila melanogaster CG17283-PA
           protein.
          Length = 465

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/40 (45%), Positives = 23/40 (57%)
 Frame = +3

Query: 510 SRHRRMEAVRIRKENQIYSADEKRALAAFSKDERNKRENA 629
           S  RR  AVR    N+  SA   R LAA S+++R +R NA
Sbjct: 29  SADRRSLAVRSGHRNERSSALHGRGLAARSRNQRKRRLNA 68


>M23221-1|AAA28540.1| 2038|Drosophila melanogaster fsh protein.
          Length = 2038

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = -3

Query: 492  QQLHRRQFHQM*VQFLLCVEFSFRLPQKQPWQHLLQ---VVEHHQA 364
            QQ H++Q HQ   Q L   +   +  Q+Q  QHL Q     +HHQA
Sbjct: 1524 QQQHQQQHHQQQQQQLTQQQLQQQQQQQQQQQHLQQQQHQQQHHQA 1569


>BT001473-1|AAN71228.1| 1010|Drosophila melanogaster LD07709p
           protein.
          Length = 1010

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +3

Query: 546 KENQIYSADEKRALAAFSKDERNKRENAILSQFRDVLKARQKRET 680
           K NQI   D K   A  SKDE + R +     FR+V+ + +K+ T
Sbjct: 363 KNNQIQQLD-KNLDAQASKDEASMRNSNDSLNFREVIPSDEKKHT 406


>AE014135-156|AAF59399.3| 1010|Drosophila melanogaster CG32016-PC,
           isoform C protein.
          Length = 1010

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +3

Query: 546 KENQIYSADEKRALAAFSKDERNKRENAILSQFRDVLKARQKRET 680
           K NQI   D K   A  SKDE + R +     FR+V+ + +K+ T
Sbjct: 363 KNNQIQQLD-KNLDAQASKDEASMRNSNDSLNFREVIPSDEKKHT 406


>AE014135-155|AAF59400.3| 1010|Drosophila melanogaster CG32016-PB,
           isoform B protein.
          Length = 1010

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +3

Query: 546 KENQIYSADEKRALAAFSKDERNKRENAILSQFRDVLKARQKRET 680
           K NQI   D K   A  SKDE + R +     FR+V+ + +K+ T
Sbjct: 363 KNNQIQQLD-KNLDAQASKDEASMRNSNDSLNFREVIPSDEKKHT 406


>AE014135-154|AAF59398.3| 1002|Drosophila melanogaster CG32016-PA,
           isoform A protein.
          Length = 1002

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +3

Query: 546 KENQIYSADEKRALAAFSKDERNKRENAILSQFRDVLKARQKRET 680
           K NQI   D K   A  SKDE + R +     FR+V+ + +K+ T
Sbjct: 355 KNNQIQQLD-KNLDAQASKDEASMRNSNDSLNFREVIPSDEKKHT 398


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,033,969
Number of Sequences: 53049
Number of extensions: 498273
Number of successful extensions: 1626
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1626
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)