Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0494
         (473 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-356|AAF45746.1|   96|Drosophila melanogaster CG17777-PA...    34   0.085
BT010220-1|AAQ23538.1|  277|Drosophila melanogaster RH05666p pro...    34   0.11 
AY061007-1|AAL28555.1|  277|Drosophila melanogaster HL02234p pro...    34   0.11 
AE014134-2434|AAF53359.1|  277|Drosophila melanogaster CG16884-P...    34   0.11 
AY069544-1|AAL39689.1|  328|Drosophila melanogaster LD27203p pro...    33   0.20 
AE013599-2451|AAF57876.1|  328|Drosophila melanogaster CG30101-P...    33   0.20 
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical...    28   5.6  
AY070658-1|AAL48129.1|  270|Drosophila melanogaster RH04334p pro...    28   7.4  
AE014134-2433|AAF53358.2|  270|Drosophila melanogaster CG16885-P...    28   7.4  
AE014134-2432|AAN10857.1|  156|Drosophila melanogaster CG16885-P...    28   7.4  
AY118357-1|AAM48386.1|  920|Drosophila melanogaster RE03056p pro...    27   9.8  
AE013599-1937|AAM68547.1|  920|Drosophila melanogaster CG30480-P...    27   9.8  

>AE014298-356|AAF45746.1|   96|Drosophila melanogaster CG17777-PA
           protein.
          Length = 96

 Score = 34.3 bits (75), Expect = 0.085
 Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +3

Query: 81  PKAVEEKKQDKRGIYDIG-SYGGH 149
           P AV+EKK +KRGIY  G  YGG+
Sbjct: 19  PSAVDEKKTEKRGIYGFGHGYGGY 42


>BT010220-1|AAQ23538.1|  277|Drosophila melanogaster RH05666p
           protein.
          Length = 277

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = +3

Query: 12  MKYTVILVASLAVVAFAKEEKGTPKAVEEKKQDKRGIYDIGSYGGH 149
           MK  + L A L   A A + +G  K   EKK DKRG+ D+G   GH
Sbjct: 1   MKVFICLAALLVASACASKTEGE-KVPLEKKLDKRGLLDLGYGYGH 45


>AY061007-1|AAL28555.1|  277|Drosophila melanogaster HL02234p
           protein.
          Length = 277

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = +3

Query: 12  MKYTVILVASLAVVAFAKEEKGTPKAVEEKKQDKRGIYDIGSYGGH 149
           MK  + L A L   A A + +G  K   EKK DKRG+ D+G   GH
Sbjct: 1   MKVFICLAALLVASACASKTEGE-KVPLEKKLDKRGLLDLGYGYGH 45


>AE014134-2434|AAF53359.1|  277|Drosophila melanogaster CG16884-PA
           protein.
          Length = 277

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = +3

Query: 12  MKYTVILVASLAVVAFAKEEKGTPKAVEEKKQDKRGIYDIGSYGGH 149
           MK  + L A L   A A + +G  K   EKK DKRG+ D+G   GH
Sbjct: 1   MKVFICLAALLVASACASKTEGE-KVPLEKKLDKRGLLDLGYGYGH 45


>AY069544-1|AAL39689.1|  328|Drosophila melanogaster LD27203p
           protein.
          Length = 328

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = +3

Query: 420 HVPYTXXNKVPYEVKVPV 473
           HVPYT   K+PYEVKV V
Sbjct: 72  HVPYTVEKKIPYEVKVDV 89



 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +3

Query: 423 VPYTXXNKVPYEVKVPV 473
           VPYT    VPYEVKVP+
Sbjct: 263 VPYTVEKPVPYEVKVPI 279



 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 426 PYTXXNKVPYEVKVPV 473
           PY    K+PYEVKVPV
Sbjct: 116 PYEVIKKIPYEVKVPV 131



 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 426 PYTXXNKVPYEVKVPV 473
           PY    K+PYEVKVPV
Sbjct: 144 PYEVIKKIPYEVKVPV 159


>AE013599-2451|AAF57876.1|  328|Drosophila melanogaster CG30101-PA
           protein.
          Length = 328

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = +3

Query: 420 HVPYTXXNKVPYEVKVPV 473
           HVPYT   K+PYEVKV V
Sbjct: 72  HVPYTVEKKIPYEVKVDV 89



 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +3

Query: 423 VPYTXXNKVPYEVKVPV 473
           VPYT    VPYEVKVP+
Sbjct: 263 VPYTVEKPVPYEVKVPI 279



 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 426 PYTXXNKVPYEVKVPV 473
           PY    K+PYEVKVPV
Sbjct: 116 PYEVIKKIPYEVKVPV 131



 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 426 PYTXXNKVPYEVKVPV 473
           PY    K+PYEVKVPV
Sbjct: 144 PYEVIKKIPYEVKVPV 159


>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
           protein protein.
          Length = 1830

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = -3

Query: 195 HSFRDRRSLHRYLRNYVLHKILCHRCPFCLVSSLRLPSVCLSPPWQRQPRPT 40
           H  RD  S+H        H  L HR P     +    S   SPP Q+ PRP+
Sbjct: 472 HQLRDCTSMHSCFTCKGRHHTLLHRSP----PNSENASSSTSPPTQQLPRPS 519


>AY070658-1|AAL48129.1|  270|Drosophila melanogaster RH04334p
           protein.
          Length = 270

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 22/43 (51%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
 Frame = +3

Query: 30  LVASLAVVAFAKEEKGTPKAVE-----EKKQDKRGIYDIGSYG 143
           LVA   +VA A EE    KAVE     EKKQ+KRGI     YG
Sbjct: 9   LVAMCVLVANASEE-APKKAVETAEPAEKKQEKRGIGHGLGYG 50


>AE014134-2433|AAF53358.2|  270|Drosophila melanogaster CG16885-PA,
           isoform A protein.
          Length = 270

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 22/43 (51%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
 Frame = +3

Query: 30  LVASLAVVAFAKEEKGTPKAVE-----EKKQDKRGIYDIGSYG 143
           LVA   +VA A EE    KAVE     EKKQ+KRGI     YG
Sbjct: 9   LVAMCVLVANASEE-APKKAVETAEPAEKKQEKRGIGHGLGYG 50


>AE014134-2432|AAN10857.1|  156|Drosophila melanogaster CG16885-PB,
           isoform B protein.
          Length = 156

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 22/43 (51%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
 Frame = +3

Query: 30  LVASLAVVAFAKEEKGTPKAVE-----EKKQDKRGIYDIGSYG 143
           LVA   +VA A EE    KAVE     EKKQ+KRGI     YG
Sbjct: 9   LVAMCVLVANASEE-APKKAVETAEPAEKKQEKRGIGHGLGYG 50


>AY118357-1|AAM48386.1|  920|Drosophila melanogaster RE03056p
           protein.
          Length = 920

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 87  PSVCLSPPWQRQPRPTMPPK*PC 19
           P    SPP Q++ +PT PPK  C
Sbjct: 890 PETNQSPPIQKRDKPTEPPKRRC 912


>AE013599-1937|AAM68547.1|  920|Drosophila melanogaster CG30480-PA
           protein.
          Length = 920

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 87  PSVCLSPPWQRQPRPTMPPK*PC 19
           P    SPP Q++ +PT PPK  C
Sbjct: 890 PETNQSPPIQKRDKPTEPPKRRC 912


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,814,295
Number of Sequences: 53049
Number of extensions: 282602
Number of successful extensions: 871
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)