Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0488
(802 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 485 e-137
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 479 e-135
SB_56| Best HMM Match : Actin (HMM E-Value=0) 478 e-135
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 475 e-134
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 376 e-105
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 252 2e-67
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 225 3e-59
SB_54| Best HMM Match : Actin (HMM E-Value=0) 224 8e-59
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 205 4e-53
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 172 2e-43
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 106 2e-23
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 81 8e-16
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 71 8e-13
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 58 6e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 3e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.067
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.088
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.12
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.36
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.36
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 33 0.36
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 32 0.62
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.82
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.82
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.82
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 1.1
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 1.1
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 1.4
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 31 1.4
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 31 1.4
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 1.4
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 1.9
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 1.9
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.9
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.9
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 1.9
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.9
SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94) 30 2.5
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 30 2.5
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 2.5
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 29 3.3
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 29 4.4
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 4.4
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 4.4
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 29 5.8
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 29 5.8
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 5.8
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 29 5.8
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 29 5.8
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 5.8
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 28 7.7
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 28 7.7
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 7.7
SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21) 28 7.7
SB_36012| Best HMM Match : DUF755 (HMM E-Value=0.064) 28 7.7
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 28 7.7
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 485 bits (1195), Expect = e-137
Identities = 227/234 (97%), Positives = 232/234 (99%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 278
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 279 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 458
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 459 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 638
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 639 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAFS 800
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA S
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASS 234
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 479 bits (1181), Expect = e-135
Identities = 225/234 (96%), Positives = 231/234 (98%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 278
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 279 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 458
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 459 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 638
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180
Query: 639 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAFS 800
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA S
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMETAASS 234
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 478 bits (1179), Expect = e-135
Identities = 225/232 (96%), Positives = 230/232 (99%)
Frame = +3
Query: 105 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 284
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 285 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 464
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 465 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 644
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 645 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAFS 800
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA S
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASS 233
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 475 bits (1172), Expect = e-134
Identities = 224/232 (96%), Positives = 230/232 (99%)
Frame = +3
Query: 105 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 284
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 285 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 464
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 465 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 644
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 645 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAFS 800
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVALDFEQEMATAA S
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATAAAS 233
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 376 bits (926), Expect = e-105
Identities = 189/234 (80%), Positives = 197/234 (84%)
Frame = +3
Query: 99 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 278
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 279 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 458
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 459 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 638
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DS G + H +
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS------------GDGVSHTV---- 164
Query: 639 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAFS 800
I ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA S
Sbjct: 165 -----------PIYEERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASS 207
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 252 bits (618), Expect = 2e-67
Identities = 118/228 (51%), Positives = 159/228 (69%), Gaps = 3/228 (1%)
Frame = +3
Query: 117 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 290
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 291 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 467
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 468 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 647
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AG
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAG 186
Query: 648 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 791
RD+T YL+K++ RGY+F TA+ E VR +KEKLCYV + EQE A
Sbjct: 187 RDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYVGYNIEQEQKLA 234
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 225 bits (550), Expect = 3e-59
Identities = 108/119 (90%), Positives = 114/119 (95%)
Frame = +3
Query: 444 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 623
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 624 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAFS 800
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAA S
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASS 196
Score = 183 bits (445), Expect = 2e-46
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +3
Query: 105 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 284
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 285 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 371
RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 224 bits (547), Expect = 8e-59
Identities = 100/150 (66%), Positives = 125/150 (83%)
Frame = +3
Query: 351 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 530
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 531 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 710
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 711 AEREIVRDIKEKLCYVALDFEQEMATAAFS 800
AE++I+RD+KE LCY A+D+E+E+ A S
Sbjct: 2249 AEQQIIRDLKETLCYCAMDYERELKEAETS 2278
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 123 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 224
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 205 bits (500), Expect = 4e-53
Identities = 96/106 (90%), Positives = 102/106 (96%)
Frame = +3
Query: 465 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 644
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 645 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 782
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 172 bits (419), Expect = 2e-43
Identities = 74/116 (63%), Positives = 101/116 (87%)
Frame = +3
Query: 399 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 578
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 579 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 746
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 106 bits (254), Expect = 2e-23
Identities = 47/126 (37%), Positives = 80/126 (63%)
Frame = +3
Query: 309 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 488
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 489 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 668
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 669 MKILTE 686
++ E
Sbjct: 123 RQMFEE 128
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 81.4 bits (192), Expect = 8e-16
Identities = 40/92 (43%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = +3
Query: 510 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 686
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 687 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 782
RG++FT+++ +IV DIKEK+CY++ D +E+
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKDHLKEV 858
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +3
Query: 93 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 263
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 264 GDEAQSKRGILTL 302
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 71.3 bits (167), Expect = 8e-13
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Frame = +3
Query: 477 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 653
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AGRD
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 654 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 785
+T ++ ++L ER E + IKE+ Y+ D +E A
Sbjct: 98 ITFFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFA 141
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 108 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 224
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 58.4 bits (135), Expect = 6e-09
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 8/182 (4%)
Frame = +3
Query: 111 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 290
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 291 ILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 464
L Y P + G + NWD ++IW +TF E + M +
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDE 323
Query: 465 IMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 626
I+FE +N A+ A LS Y S +V+D+G +H VP++ G + A+
Sbjct: 324 ILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAV 383
Query: 627 LR 632
R
Sbjct: 384 RR 385
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 3e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +3
Query: 237 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 416
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.47
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 546 TGIVLDSGDGVSHTVPI 596
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 221 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 105
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +3
Query: 354 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 533
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 534 SGRTTGIV 557
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 35.1 bits (77), Expect = 0.067
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +1
Query: 490 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 627
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 469 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW--TPATVSPTPCPSTKDTHSPTPSC 630
CS+HS +P C PSK C + V+PP + T ++ P C ++ P C
Sbjct: 1521 CSEHSCKPEC--PSKCCMK----VLPPTTLGQNTANSLCPVYCLTSCKPDCPIKCC 1570
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 34.7 bits (76), Expect = 0.088
Identities = 29/77 (37%), Positives = 34/77 (44%)
Frame = +2
Query: 500 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDP 679
RR S A R RS R R+ RRR RR R+P H S SRSR R P
Sbjct: 211 RRSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSR-SRSPRRRH 269
Query: 680 HRARLLVHYHRRAGNRS 730
R+R H R+ + S
Sbjct: 270 SRSRSPTHRRHRSRSHS 286
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 490 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTKDTHSPTPS 627
P TSP + P +R P+ PP C + V PTP S+K + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 478 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 591
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 493 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 591
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 33.5 bits (73), Expect = 0.20
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 478 HSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 627
HST ++PS P + CT P P P + TP+T S PST T S TPS
Sbjct: 63 HSTPSAPSTPSTPSTPCT-PSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +1
Query: 475 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSP--TPS 627
K+ R ++PS PC+ T P P P + TP+T S TPC PST T S TPS
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPS 55
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +1
Query: 499 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSPTP 624
++PS PC+ T P P P + TP+T S TPC PST T S TP
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TP 416
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 472 SKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 627
S ST +PS P + CT P P P + TP+T S TPC + + TPS
Sbjct: 22 STPSTPSTPRTPSTPSTPCT-PSTPSTPSTPITPSTPS-TPCTHSTPSAPSTPS 73
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Frame = +1
Query: 493 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTKDTHSP 618
P T PC + CT+ +P +TP T TPC PST+ +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +1
Query: 469 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 591
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +1
Query: 493 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 591
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 32.7 bits (71), Expect = 0.36
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +1
Query: 490 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 627
P SP+ P P P + TP T +PT TK T + TP+
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 484 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 627
T P T+P++ T P + TP +PTP T T +PT S
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 490 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTKDTHSPTPS 627
P +P+KP P + TP T SPT P +T +PTP+
Sbjct: 31 PTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPT 77
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 481 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 621
+T P T K + T + P TP PTP T T +PT
Sbjct: 72 ATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = +1
Query: 484 TRP-PCTSPS--KPCSRCTRPVVPPVSCWTPATVSP-TPCPS--TKDTHSPT 621
T+P P T+P+ KP P P + TP +P TP P+ T H+PT
Sbjct: 92 TKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPT 143
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 484 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP-TPS 627
T+P T+P+ T P S P +PTP T T +P TP+
Sbjct: 37 TKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPT 85
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +1
Query: 481 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPCPSTKDTHSPTPS 627
ST P T+P+ T P + TP +P TP P+T PTP+
Sbjct: 46 STAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPA 97
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 490 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 585
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.7 bits (71), Expect = 0.36
Identities = 21/88 (23%), Positives = 30/88 (34%)
Frame = +1
Query: 364 IPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 543
+PS M C PP S + T T+P+ P + T P
Sbjct: 86 LPSWMPCNCPPDEDDSKGGAAGAEEKEEGEGGGDTPTTAPTTA-ATTPTTPTTAPTTPTT 144
Query: 544 PPVSCWTPATVSPTPCPSTKDTHSPTPS 627
P + TP T + TP +P P+
Sbjct: 145 PTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 487 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHS 615
+PP T+PSK T P+ P++ TP T T +TK T S
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.82
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 300 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 452
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 196 GNTARGASSPAKPALHIPEPLSTT 125
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.82
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 441 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 557
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.82
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 344 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 168
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251
Query: 167 CETGLAHT 144
CET L T
Sbjct: 252 CETQLVPT 259
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 31.5 bits (68), Expect = 0.82
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -1
Query: 646 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNM 467
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 466 IWVIFSLLALGLR 428
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -1
Query: 646 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 509
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -1
Query: 646 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 509
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 196 GNTARGASSPAKPALHIPEPLSTT 125
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 344 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 168
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309
Query: 167 CETGLAHT 144
CET L T
Sbjct: 310 CETQLVLT 317
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 344 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 168
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129
Query: 167 CETGLAHT 144
CET L T
Sbjct: 130 CETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 344 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 168
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163
Query: 167 CETGLAHT 144
CET L T
Sbjct: 164 CETQLVLT 171
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 344 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 168
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446
Query: 167 CETGLAHT 144
CET L T
Sbjct: 447 CETQLVLT 454
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 344 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 168
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287
Query: 167 CETGLAHT 144
CET L T
Sbjct: 288 CETQLVLT 295
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 478 HSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTP 624
H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 30.7 bits (66), Expect = 1.4
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -1
Query: 586 VWE--TPSPESSTIPVVRPD-------AYSESTAWMATYMAGVLNVSNMIWVIFSLLALG 434
VWE T P + T+P + D Y S +W+ VL N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 433 LRGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS 269
L A + T C T +L + ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 499 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTK 603
+SP KP T+PVVP P+ + P P PS+K
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 344 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 168
V+PV S D + S +C ++LSH + H M D +HG RS S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211
Query: 167 CETGLAHT 144
CET L T
Sbjct: 212 CETQLVLT 219
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 371 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 204
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 210 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 268
Query: 203 DRGEHGARSIISCETGLAHT 144
+HG R +SCET L T
Sbjct: 269 SIFQHGFRQALSCETQLVLT 288
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 196 GNTARGASSPAKPALHIPEPLSTT 125
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 425 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 517
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 478 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 627
H RPP S P +R T P P + PAT +PT +T + TP+
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 481 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 627
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 137 TTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +1
Query: 481 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPT-PCPSTKD-THSPTPSCVWT*P 645
+T P T+P+KP + T P + PAT +PT P +T T +PT S T P
Sbjct: 123 TTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPP 182
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 481 STRPPC-TSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 627
+T PP T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 52 TTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 481 STRPPCTSPSKPCSRC---TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 627
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 109 TTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 160
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 371 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 204
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 203 DRGEHGARSIISCETGLAHT 144
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 371 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 204
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1609 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1667
Query: 203 DRGEHGARSIISCETGLAHT 144
+HG R +SCET L T
Sbjct: 1668 SIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 371 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 204
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 637 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 695
Query: 203 DRGEHGARSIISCETGLAHT 144
+HG R +SCET L T
Sbjct: 696 SIFQHGFRQALSCETQLVLT 715
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.9
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 505 PSKPCSRCTRPVVPP 549
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/83 (27%), Positives = 29/83 (34%)
Frame = +2
Query: 422 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 601
G G + PDH + R P L V R+ + GL +R PH
Sbjct: 320 GPDHTHGVSKRTAPDHPLGLSK----RTAPDHTLGVSKRTAPDHPHGLSKRTAPHHPLGL 375
Query: 602 RIRTPPRHPASGLSRSRPHRLPH 670
T P HP R+ P PH
Sbjct: 376 SKSTAPDHPHGVSKRTAPDH-PH 397
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +2
Query: 434 PQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRT 613
P G + PDH + ++H P L + R+ + G+ +R PH T
Sbjct: 192 PHGVSKRTAPDHPHGV--SKHTA--PDHTLGLSKRTGPDHTHGVSKRTAPHHPLGLSKHT 247
Query: 614 PPRHPASGLSR 646
P HP GLS+
Sbjct: 248 APDHP-HGLSK 257
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 371 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 204
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1047 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1105
Query: 203 DRGEHGARSIISCETGLAHT 144
+HG R +SCET L T
Sbjct: 1106 SIFQHGFRQALSCETQLVLT 1125
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 371 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 204
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 203 DRGEHGARSIISCETGLAHT 144
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94)
Length = 592
Score = 29.9 bits (64), Expect = 2.5
Identities = 30/103 (29%), Positives = 37/103 (35%)
Frame = +2
Query: 482 QHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHR 661
Q RRHP R R+ + G+R R P +RR RT R + R R H
Sbjct: 356 QRGERERRHPPGVAICRYRTRQVSQRGVRERRNPPGVAIRRYRT--RQVSQRGERERRHH 413
Query: 662 LPHEDPHRARLLVHYHRRAGNRS*HQGEAVLRRS*LRAGNGHR 790
P R R R R H G A+ R + G R
Sbjct: 414 -PGVAICRYRTRQVSQRGKRERRHHPGVAICRYRTRQTGESTR 455
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +1
Query: 490 PPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTKDTHSPTP 624
PP T P+ P S P VP + P V+P P + PTP
Sbjct: 332 PPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTP 377
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +1
Query: 493 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 591
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 493 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 597
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 278 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 144
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 464 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIR 610
DH + I+ V RH L R R+ H +R L+ + H+A LR ++
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREVQ 322
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 526 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 627
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +1
Query: 475 KHSTRPPCTSPSKPCSRCTRPVVPPVSC----WTPAT-VSPTPCPSTKDTHSPTP 624
KH + P PS P S ++P + P T + PTP P T +PTP
Sbjct: 205 KHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 344 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 168
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262
Query: 167 CETGLAHT 144
CET L T
Sbjct: 263 CETQLVLT 270
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 344 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 168
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 2 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60
Query: 167 CETGLAHT 144
CET L T
Sbjct: 61 CETQLVLT 68
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 28.7 bits (61), Expect = 5.8
Identities = 26/77 (33%), Positives = 38/77 (49%)
Frame = +2
Query: 500 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDP 679
RR+ SR+ + R RS +R R+ R R R+ R+ S SRSR + P P
Sbjct: 147 RRYRSRSDS-RPRSRYRGRSRSRSRDRYRERRPRKSRSKSLD-RSRRSRSRSYSRPSPSP 204
Query: 680 HRARLLVHYHRRAGNRS 730
+R+R RR+ +RS
Sbjct: 205 YRSRRSRSRTRRSRSRS 221
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.7 bits (61), Expect = 5.8
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = -3
Query: 284 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 120
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 119 GNFFVAHLE 93
G V L+
Sbjct: 521 GQVDVLLLD 529
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 429 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 557
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 487 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 624
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 499 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 636
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 529 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 633
T VVPP+ P V P+P + + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +2
Query: 428 PQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRI 607
PQ G EDD D+V+ ++ +RH + +V+ S RA RR R +R
Sbjct: 647 PQVDGANDEDDTDNVQLESRSQGQQRHSNSKSSVQSSSELVKRARTTRRLGVSRVKIRVS 706
Query: 608 RTPPRHPASGLSRSR 652
+T + P+ +R++
Sbjct: 707 QTHSQ-PSQATARTQ 720
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +1
Query: 505 PSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PV 648
PS P S PV V T T +PT C T + P+C+ PV
Sbjct: 85 PSSPVSPLPSPVPAVAATPSQTYCTSTPTSCTPTTTCYLQVPTCILIPPV 134
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 475 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 627
K TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 428 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +2
Query: 479 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRC---LPHRAHLRRIRT-PPRHPASGLSR 646
I H++ RH S+ L R R HR + RR + H ++L R R P ++ +
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRPRNWVPPFNSTAMIF 1647
Query: 647 SRPH 658
+PH
Sbjct: 1648 GKPH 1651
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 502 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 624
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -1
Query: 580 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 407
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 406 G 404
G
Sbjct: 147 G 147
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 526 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P 645
CT P ++ P T + T P TK P PS + T P
Sbjct: 150 CTGTPEPTITSKPPVTETTTTKPETKPPKPPAPSTIPTPP 189
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 458 DPDHV-RNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRH 625
DP HV R +RHVRR PS + VR ++ +RR L R H+R RH
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDSRH--VRRNTLDSR-HVRCNTLDSRH 277
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 196 GNTARGASSPAKPALHIPEPLSTT 125
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 196 GNTARGASSPAKPALHIPEPLSTT 125
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 581 PHRAHLRRIRTPPR-HPASGLSRSRPHRLPHEDPH 682
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21)
Length = 226
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +1
Query: 469 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS--CWTPATVSPTPCPSTKDTHSPT 621
C +H T K C C + PP+ T T +PT P TK T +PT
Sbjct: 167 CRRHKTYMNIYC-RKSCGFCGKAPHPPIQEPPVTKTTTAPTEPPVTKTTTAPT 218
>SB_36012| Best HMM Match : DUF755 (HMM E-Value=0.064)
Length = 265
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/89 (25%), Positives = 32/89 (35%), Gaps = 3/89 (3%)
Frame = +2
Query: 422 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 601
G P ED D + ++ R S + R+++ + R R H R
Sbjct: 82 GGPSRHNNASEDSFDSGEEEKRNKNSARKMSPINGHKSSRKSRHKSDKKERASRKRRHSR 141
Query: 602 RIRTPPRHPASGLS--RSRPHRL-PHEDP 679
P RHP+ S R R RL H P
Sbjct: 142 SESPPVRHPSGSQSGDRQRERRLHKHSSP 170
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 28.3 bits (60), Expect = 7.7
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 6/101 (5%)
Frame = -3
Query: 776 LLEVKSDVAQLLLDVTNDFPLGGGSERVAALGEDLHEVVCEVATG*VQTQDGVGECVS-- 603
++ V V ++L V + G G + + + +D V + A G V GVG+
Sbjct: 16 VVSVMMVVLVMMLMVRDSDDGGVGDDAIGRVSDD--GGVGDDADGRVSDDGGVGDDADGR 73
Query: 602 FVDGHGVGDTVAGVQHDTGG----TTGRVQREHGLDGDVHG 492
D GVGD G D GG GRV + G+ D G
Sbjct: 74 VSDDGGVGDDADGRVSDDGGVGDNAEGRVSDDGGVGDDAIG 114
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,464,099
Number of Sequences: 59808
Number of extensions: 726346
Number of successful extensions: 3034
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 2407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2958
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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