Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0483
         (786 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   6.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   6.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   8.4  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   8.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   8.4  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +3

Query: 15  RNSFVIKKPINMPNYSYTPTIGRTYVYDNKYYKNLGCLIKNAKRKKHLV 161
           +N  ++      PNY        TY+  NKY      L+K++K K  L+
Sbjct: 5   KNKLLLLDSSTQPNYLILSNKNNTYLVLNKY-----LLVKHSKPKMPLL 48


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 477 EEDYVPHEVIRIVEPSY 527
           E+ Y+  EV+R+ +P Y
Sbjct: 337 EKKYILQEVVRVKKPHY 353


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 189 DLLDNYMVAEDPFLGPGKNQKLTLFKEIRSVKPDTM 296
           DL+ NY +A    + P  + K  +F  I   K +++
Sbjct: 298 DLIPNYYIAHFINIDPENHNKTEIFLNITGDKTNSV 333


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 407 EVHVHHLLVVYNGEAVLNKTGPSFT 333
           EV+ HH  +  +   +  +TG S+T
Sbjct: 62  EVYYHHQTIPQDNPIINTETGLSYT 86


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = -3

Query: 403 YTSITSWSFTMGKLSSTKRVQVSRKNSLPLQLTINFMVSGFTLRISLKRVSFWFL 239
           Y S    S+T+  + S  R+  +  NSL +   + F+     + ++L    F FL
Sbjct: 57  YFSFYITSYTLLSVYSLFRIATNENNSLVINKRLIFIECFVMMALTLIVTLFTFL 111


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = -3

Query: 403 YTSITSWSFTMGKLSSTKRVQVSRKNSLPLQLTINFMVSGFTLRISLKRVSFWFL 239
           Y S    S+T+  + S  R+  +  NSL +   + F+     + ++L    F FL
Sbjct: 57  YFSFYITSYTLLSVYSLFRIATNENNSLVINKRLIFIECFVMMALTLIVTLFTFL 111


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 407 EVHVHHLLVVYNGEAVLNKTGPSFT 333
           EV+ HH  +  +   +  +TG S+T
Sbjct: 62  EVYYHHQTIPQDNPIINTETGLSYT 86


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 407 EVHVHHLLVVYNGEAVLNKTGPSFT 333
           EV+ HH  +  +   +  +TG S+T
Sbjct: 62  EVYYHHQTIPQDNPIINTETGLSYT 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,198
Number of Sequences: 336
Number of extensions: 4647
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)