Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0482
         (643 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9YVK9 Cluster: ORF MSV234 hypthetical protein; n=1; Me...    37   0.36 
UniRef50_Q65156 Cluster: PC717R; n=1; African swine fever virus|...    33   5.9  

>UniRef50_Q9YVK9 Cluster: ORF MSV234 hypthetical protein; n=1;
           Melanoplus sanguinipes entomopoxvirus|Rep: ORF MSV234
           hypthetical protein - Melanoplus sanguinipes
           entomopoxvirus (MsEPV)
          Length = 117

 Score = 37.1 bits (82), Expect = 0.36
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = -2

Query: 570 YVMFCYHHYDVNPLHQIFLMQICVILNLRN*SHFHFRFQSLIRWSHFYLLFHLWNHFQIH 391
           Y  + Y H+DV   H  F   +    +  +  H +F F       HF++ FHL +H   H
Sbjct: 3   YQFYLYPHFDVFSFHFYFHFHLHSYFHFHHHFHVYFHFH---HHHHFHVYFHLHHHHHFH 59

Query: 390 LW 385
           ++
Sbjct: 60  VY 61



 Score = 37.1 bits (82), Expect = 0.36
 Identities = 21/86 (24%), Positives = 36/86 (41%)
 Frame = -2

Query: 642 VLNLHQNYFYQYDGQILMNSHYHSYVMFCYHHYDVNPLHQIFLMQICVILNLRN*SHFHF 463
           V + H  + +        + H+H Y  F +HH+     H        V  +L   S+FHF
Sbjct: 13  VFSFHFYFHFHLHSYFHFHHHFHVYFHFHHHHHFHVYFHLHHHHHFHVYFHLH--SYFHF 70

Query: 462 RFQSLIRWSHFYLLFHLWNHFQIHLW 385
                  + HF+  FH ++H   H++
Sbjct: 71  HHHHFHVYFHFHSYFH-FHHHHFHVY 95


>UniRef50_Q65156 Cluster: PC717R; n=1; African swine fever
           virus|Rep: PC717R - African swine fever virus (ASFV)
          Length = 717

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 21/64 (32%), Positives = 30/64 (46%)
 Frame = +3

Query: 105 LQFVNEYYQN*SYFILVVIRTYSSTKWRRFTRFCSQMILFNFSLFHENMIKIYLFSILIR 284
           L FVN +Y+N S  IL V+R Y              +IL NF+ F  ++  I  ++I   
Sbjct: 499 LAFVNTFYRNQSEHILKVLRYYFPEMLTNRENEIQGVILSNFNFFFNSITAIDFYAIARN 558

Query: 285 FFSM 296
             SM
Sbjct: 559 LRSM 562


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,063,886
Number of Sequences: 1657284
Number of extensions: 7906915
Number of successful extensions: 20593
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20525
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)