Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0482
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    24   1.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.8  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   3.7  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   4.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   6.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   6.5  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    21   8.6  

>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 576 DNANSSKSDHHTDKNSSG 629
           DN+  SK  H TD+ +SG
Sbjct: 20  DNSEDSKDPHLTDQQASG 37


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 463 KVKVALVPQVQDHTDLHQKNLV*GVHII-VMIAKHHITMIMRIHQN 597
           K+++ L+   Q  TDLH+K       +I V + +H  +M+  ++ +
Sbjct: 125 KIEINLLKHYQSTTDLHKKIRYSAFGMIFVALLEHCFSMLNYVYSS 170


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 504 CVILNLRN*SHFHFRFQSLIRWS 436
           C+ L +    H  F+F S + WS
Sbjct: 66  CLFLEMTLAHHCRFKFSSSVGWS 88


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 85  QKIKNETLSRQEHQSYTR 32
           +KIKNE + ++  + YTR
Sbjct: 256 EKIKNEIIWKKLREDYTR 273


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 630 HQNYFYQYDGQILMNSHY 577
           HQNY   Y G+    +HY
Sbjct: 374 HQNYVQGYQGEHPNYNHY 391


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 630 HQNYFYQYDGQILMNSHY 577
           HQNY   Y G+    +HY
Sbjct: 322 HQNYVQGYQGEHPNYNHY 339


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +1

Query: 430 KVTPANQALEAKVKVALVPQVQDHTDLHQKNLV*GVHIIV 549
           K TP+ + L+  +  AL  +     D H++ +   +H +V
Sbjct: 50  KCTPSGEELKKDIPDALKNECAKCNDKHKEGIRKVIHYLV 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,944
Number of Sequences: 336
Number of extensions: 2452
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)