Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0482
         (643 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030780-1|AAH30780.1|  328|Homo sapiens coiled-coil domain cont...    30   8.0  
AK058091-1|BAB71661.1|  328|Homo sapiens protein ( Homo sapiens ...    30   8.0  
AF367469-1|AAK53405.1|  328|Homo sapiens testes development-rela...    30   8.0  

>BC030780-1|AAH30780.1|  328|Homo sapiens coiled-coil domain
           containing 54 protein.
          Length = 328

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 17/45 (37%), Positives = 27/45 (60%)
 Frame = +1

Query: 391 MNLKVIPQVKKEIKVTPANQALEAKVKVALVPQVQDHTDLHQKNL 525
           MNL V+ Q  K  +V   +Q  +    V ++P+VQ+ TDL+QK +
Sbjct: 64  MNLPVVLQDVKTAQVELFSQMTDI---VHMIPKVQEKTDLYQKQM 105


>AK058091-1|BAB71661.1|  328|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25362 fis, clone TST01724. ).
          Length = 328

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 17/45 (37%), Positives = 27/45 (60%)
 Frame = +1

Query: 391 MNLKVIPQVKKEIKVTPANQALEAKVKVALVPQVQDHTDLHQKNL 525
           MNL V+ Q  K  +V   +Q  +    V ++P+VQ+ TDL+QK +
Sbjct: 64  MNLPVVLQDVKTAQVELFSQMTDI---VHMIPKVQEKTDLYQKQM 105


>AF367469-1|AAK53405.1|  328|Homo sapiens testes development-related
           NYD-SP17 protein.
          Length = 328

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 17/45 (37%), Positives = 27/45 (60%)
 Frame = +1

Query: 391 MNLKVIPQVKKEIKVTPANQALEAKVKVALVPQVQDHTDLHQKNL 525
           MNL V+ Q  K  +V   +Q  +    V ++P+VQ+ TDL+QK +
Sbjct: 64  MNLPVVLQDVKTAQVELFSQMTDI---VHMIPKVQEKTDLYQKQM 105


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,814,702
Number of Sequences: 237096
Number of extensions: 1241120
Number of successful extensions: 6369
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6368
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)