Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0481
         (662 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060757-1|AAL28305.1|  189|Drosophila melanogaster GH20858p pro...   266   2e-71
AE014298-2498|AAF48679.3|  189|Drosophila melanogaster CG9099-PA...   266   2e-71
U59923-1|AAC47469.1| 1714|Drosophila melanogaster glutamyl-proly...    30   2.4  
M74104-1|AAA28594.1| 1714|Drosophila melanogaster transfer RNA-G...    30   2.4  
AY061302-1|AAL28850.1|  814|Drosophila melanogaster LD21614p pro...    30   3.2  
AE014296-96|AAF47383.2|  814|Drosophila melanogaster CG6905-PA p...    30   3.2  
AY058703-1|AAL13932.1| 1714|Drosophila melanogaster LD42739p pro...    29   4.3  
AE014297-3420|AAF56211.1| 1714|Drosophila melanogaster CG5394-PA...    29   4.3  
BT011138-1|AAR82805.1|  857|Drosophila melanogaster GM05853p pro...    29   5.6  
BT011097-1|AAR82763.1|  871|Drosophila melanogaster RE21038p pro...    29   5.6  
AF104355-1|AAD08705.1|  844|Drosophila melanogaster PIWI protein.      29   5.6  
AF104354-1|AAD08704.1|  843|Drosophila melanogaster PIWI protein.      29   5.6  
AE014134-2002|AAF53043.1|  843|Drosophila melanogaster CG6122-PA...    29   5.6  
AY069174-1|AAL39319.1|  424|Drosophila melanogaster GH22081p pro...    29   7.5  
AE014296-3278|AAF49069.1|  424|Drosophila melanogaster CG7365-PA...    29   7.5  

>AY060757-1|AAL28305.1|  189|Drosophila melanogaster GH20858p
           protein.
          Length = 189

 Score =  266 bits (651), Expect = 2e-71
 Identities = 124/179 (69%), Positives = 146/179 (81%), Gaps = 2/179 (1%)
 Frame = +2

Query: 128 MADRDLSMGPREGVTYPIKVQYCGNCSMPIEYCEYYPEYDKCKQWLEKNLPTEFEKVKLD 307
           +ADR L +GPREGVTYPI+++YCG+C+MPIEYCEYYPEY+KCK+WLE ++P +FE++K++
Sbjct: 11  VADR-LQLGPREGVTYPIQMKYCGHCTMPIEYCEYYPEYEKCKEWLELHMPDDFERLKIE 69

Query: 308 XXXXXXXXXXXXXXXXXXXX--MLKSKKKEDVPKLVQVFRAPRGKKKSVTVVSGLSTFDI 481
                                 +L+ KKKEDVPK + V RA RGKKKSVTVV+GLSTFDI
Sbjct: 70  EEAAAADGTDDDKKRQKRGGKGLLRVKKKEDVPKRICVSRAARGKKKSVTVVTGLSTFDI 129

Query: 482 DLKVAAKFFGTKFACGSSVTGDDEIVIQGDVKDDLFDIIPEKWPEIDEDSIEDLGDQKK 658
           DLKVAAKFFGTKFACGSSVTGDDEIVIQGDVKDDLFD+IPEKW EIDED IEDLGDQK+
Sbjct: 130 DLKVAAKFFGTKFACGSSVTGDDEIVIQGDVKDDLFDVIPEKWAEIDEDVIEDLGDQKR 188


>AE014298-2498|AAF48679.3|  189|Drosophila melanogaster CG9099-PA
           protein.
          Length = 189

 Score =  266 bits (651), Expect = 2e-71
 Identities = 124/179 (69%), Positives = 146/179 (81%), Gaps = 2/179 (1%)
 Frame = +2

Query: 128 MADRDLSMGPREGVTYPIKVQYCGNCSMPIEYCEYYPEYDKCKQWLEKNLPTEFEKVKLD 307
           +ADR L +GPREGVTYPI+++YCG+C+MPIEYCEYYPEY+KCK+WLE ++P +FE++K++
Sbjct: 11  VADR-LQLGPREGVTYPIQMKYCGHCTMPIEYCEYYPEYEKCKEWLELHMPDDFERLKIE 69

Query: 308 XXXXXXXXXXXXXXXXXXXX--MLKSKKKEDVPKLVQVFRAPRGKKKSVTVVSGLSTFDI 481
                                 +L+ KKKEDVPK + V RA RGKKKSVTVV+GLSTFDI
Sbjct: 70  EEAAAADGTDDDKKRQKRGGKGLLRVKKKEDVPKRICVSRAARGKKKSVTVVTGLSTFDI 129

Query: 482 DLKVAAKFFGTKFACGSSVTGDDEIVIQGDVKDDLFDIIPEKWPEIDEDSIEDLGDQKK 658
           DLKVAAKFFGTKFACGSSVTGDDEIVIQGDVKDDLFD+IPEKW EIDED IEDLGDQK+
Sbjct: 130 DLKVAAKFFGTKFACGSSVTGDDEIVIQGDVKDDLFDVIPEKWAEIDEDVIEDLGDQKR 188


>U59923-1|AAC47469.1| 1714|Drosophila melanogaster
           glutamyl-prolyl-tRNA synthetase protein.
          Length = 1714

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 21/65 (32%), Positives = 28/65 (43%)
 Frame = +2

Query: 392 DVPKLVQVFRAPRGKKKSVTVVSGLSTFDIDLKVAAKFFGTKFACGSSVTGDDEIVIQGD 571
           +VP  + +F  P G  K V   SGL     D K   K      + G +   D +I  QGD
Sbjct: 699 NVPSPIVLFSIPDGHTKDVPT-SGLKVNAPDAKATKKASSPVSSSGQASELDSQITQQGD 757

Query: 572 VKDDL 586
           +  DL
Sbjct: 758 LVRDL 762


>M74104-1|AAA28594.1| 1714|Drosophila melanogaster transfer
           RNA-Glu-Pro aminoacylsynthetase protein.
          Length = 1714

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 21/65 (32%), Positives = 28/65 (43%)
 Frame = +2

Query: 392 DVPKLVQVFRAPRGKKKSVTVVSGLSTFDIDLKVAAKFFGTKFACGSSVTGDDEIVIQGD 571
           +VP  + +F  P G  K V   SGL     D K   K      + G +   D +I  QGD
Sbjct: 699 NVPSPIVLFSIPDGHTKDVPT-SGLKVNAPDAKATKKASSPVSSSGQASELDSQITQQGD 757

Query: 572 VKDDL 586
           +  DL
Sbjct: 758 LVRDL 762


>AY061302-1|AAL28850.1|  814|Drosophila melanogaster LD21614p
           protein.
          Length = 814

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 26/119 (21%), Positives = 46/119 (38%)
 Frame = +2

Query: 200 NCSMPIEYCEYYPEYDKCKQWLEKNLPTEFEKVKLDXXXXXXXXXXXXXXXXXXXXMLKS 379
           N  +P E    +  YD  ++ L+KN P +F K++                       LK 
Sbjct: 210 NAEIPFEKRPAHGFYDTSEEHLQKNEP-DFNKMRQQDLDGELRSEKEERERKRDKQKLKQ 268

Query: 380 KKKEDVPKLVQVFRAPRGKKKSVTVVSGLSTFDIDLKVAAKFFGTKFACGSSVTGDDEI 556
           +K+ +VP  +     P  +K+S  V+      D++L+   K  G        + G+  I
Sbjct: 269 RKENEVPTAMLQNMEPE-RKRSKLVLPTPQISDMELQQVVK-LGRASEMAKEIAGESGI 325


>AE014296-96|AAF47383.2|  814|Drosophila melanogaster CG6905-PA
           protein.
          Length = 814

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 26/119 (21%), Positives = 46/119 (38%)
 Frame = +2

Query: 200 NCSMPIEYCEYYPEYDKCKQWLEKNLPTEFEKVKLDXXXXXXXXXXXXXXXXXXXXMLKS 379
           N  +P E    +  YD  ++ L+KN P +F K++                       LK 
Sbjct: 210 NAEIPFEKRPAHGFYDTSEEHLQKNEP-DFNKMRQQDLDGELRSEKEERERKRDKQKLKQ 268

Query: 380 KKKEDVPKLVQVFRAPRGKKKSVTVVSGLSTFDIDLKVAAKFFGTKFACGSSVTGDDEI 556
           +K+ +VP  +     P  +K+S  V+      D++L+   K  G        + G+  I
Sbjct: 269 RKENEVPTAMLQNMEPE-RKRSKLVLPTPQISDMELQQVVK-LGRASEMAKEIAGESGI 325


>AY058703-1|AAL13932.1| 1714|Drosophila melanogaster LD42739p
           protein.
          Length = 1714

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 21/65 (32%), Positives = 28/65 (43%)
 Frame = +2

Query: 392 DVPKLVQVFRAPRGKKKSVTVVSGLSTFDIDLKVAAKFFGTKFACGSSVTGDDEIVIQGD 571
           +VP  + +F  P G  K V   SGL     D K   K      + G +   D +I  QGD
Sbjct: 699 NVPSPIVLFSIPDGHTKDVPT-SGLKVNAPDAKATKKASSPVSSSGQASELDSQISQQGD 757

Query: 572 VKDDL 586
           +  DL
Sbjct: 758 LVRDL 762


>AE014297-3420|AAF56211.1| 1714|Drosophila melanogaster CG5394-PA,
           isoform A protein.
          Length = 1714

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 21/65 (32%), Positives = 28/65 (43%)
 Frame = +2

Query: 392 DVPKLVQVFRAPRGKKKSVTVVSGLSTFDIDLKVAAKFFGTKFACGSSVTGDDEIVIQGD 571
           +VP  + +F  P G  K V   SGL     D K   K      + G +   D +I  QGD
Sbjct: 699 NVPSPIVLFSIPDGHTKDVPT-SGLKVNAPDAKATKKASSPVSSSGQASELDSQISQQGD 757

Query: 572 VKDDL 586
           +  DL
Sbjct: 758 LVRDL 762


>BT011138-1|AAR82805.1|  857|Drosophila melanogaster GM05853p
           protein.
          Length = 857

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +2

Query: 407 VQVFRAPRGKKKSVTVVSGLSTFDIDLKVAAKFFG 511
           +Q+F   R  ++ +TV+SG S  DI+ K++ KF G
Sbjct: 165 LQLFTT-RKFEQEITVLSGKSKLDIEYKISIKFVG 198


>BT011097-1|AAR82763.1|  871|Drosophila melanogaster RE21038p
           protein.
          Length = 871

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +2

Query: 407 VQVFRAPRGKKKSVTVVSGLSTFDIDLKVAAKFFG 511
           +Q+F   R  ++ +TV+SG S  DI+ K++ KF G
Sbjct: 179 LQLFTT-RKFEQEITVLSGKSKLDIEYKISIKFVG 212


>AF104355-1|AAD08705.1|  844|Drosophila melanogaster PIWI protein.
          Length = 844

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +2

Query: 407 VQVFRAPRGKKKSVTVVSGLSTFDIDLKVAAKFFG 511
           +Q+F   R  ++ +TV+SG S  DI+ K++ KF G
Sbjct: 151 LQLFTT-RKFEQEITVLSGKSKLDIEYKISIKFVG 184


>AF104354-1|AAD08704.1|  843|Drosophila melanogaster PIWI protein.
          Length = 843

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +2

Query: 407 VQVFRAPRGKKKSVTVVSGLSTFDIDLKVAAKFFG 511
           +Q+F   R  ++ +TV+SG S  DI+ K++ KF G
Sbjct: 151 LQLFTT-RKFEQEITVLSGKSKLDIEYKISIKFVG 184


>AE014134-2002|AAF53043.1|  843|Drosophila melanogaster CG6122-PA
           protein.
          Length = 843

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +2

Query: 407 VQVFRAPRGKKKSVTVVSGLSTFDIDLKVAAKFFG 511
           +Q+F   R  ++ +TV+SG S  DI+ K++ KF G
Sbjct: 151 LQLFTT-RKFEQEITVLSGKSKLDIEYKISIKFVG 184


>AY069174-1|AAL39319.1|  424|Drosophila melanogaster GH22081p
           protein.
          Length = 424

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +2

Query: 137 RDLSMGPREGVT--YPIKVQYCGNCSMPIEYCEYYPEYDKCKQWLEKNL 277
           R +   PR  +T  + +   + GN     + C YYPE +K   W E+N+
Sbjct: 200 RRMQRDPRVNMTSDWKLVTLFIGNNDFCTDIC-YYPEPEKTVDWHERNM 247


>AE014296-3278|AAF49069.1|  424|Drosophila melanogaster CG7365-PA
           protein.
          Length = 424

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +2

Query: 137 RDLSMGPREGVT--YPIKVQYCGNCSMPIEYCEYYPEYDKCKQWLEKNL 277
           R +   PR  +T  + +   + GN     + C YYPE +K   W E+N+
Sbjct: 200 RRMQRDPRVNMTSDWKLVTLFIGNNDFCTDIC-YYPEPEKTVDWHERNM 247


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,454,140
Number of Sequences: 53049
Number of extensions: 391124
Number of successful extensions: 1000
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)