Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0478
(785 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0480 + 17958726-17958926,17959294-17959382,17960176-179602... 87 1e-17
08_02_1046 - 23919990-23920183,23920251-23920479,23920624-239210... 80 2e-15
02_02_0666 - 12757555-12757688,12757968-12758029,12758156-127582... 36 0.028
08_02_0423 - 16946435-16946542,16946924-16947045,16947442-169475... 36 0.037
05_05_0299 - 23930657-23932627 33 0.34
02_02_0076 + 6581428-6581695,6582247-6582305,6582481-6582531,658... 33 0.34
08_02_1418 - 26931896-26932339,26932435-26932668,26932805-269331... 32 0.59
09_03_0009 + 11463049-11463063,11464136-11464492 31 0.79
05_01_0372 - 2913518-2916562,2916674-2917528 31 0.79
09_04_0515 + 18238434-18238545,18238659-18238709,18238844-182388... 30 2.4
03_06_0146 - 31976538-31978643,31978653-31978751 30 2.4
08_02_0095 - 12285976-12286037,12286111-12287229,12287494-122886... 29 4.2
01_06_0393 + 28968873-28968918,28969048-28969084,28969165-289693... 28 7.3
06_03_0196 - 17784747-17784833,17786061-17786333,17787982-177881... 28 9.7
05_06_0088 - 25453249-25453282,25453369-25453461,25454111-254541... 28 9.7
02_05_0583 + 30128795-30129158,30129342-30129505,30129602-301296... 28 9.7
01_07_0024 - 40559423-40559863,40559959-40560192,40560546-405608... 28 9.7
>09_04_0480 +
17958726-17958926,17959294-17959382,17960176-17960242,
17960329-17960444,17960978-17961044,17961158-17961206,
17961630-17961715,17961825-17962078,17962158-17962213,
17962683-17962768,17963047-17963139,17963790-17964219,
17964338-17964861,17964962-17965190,17965271-17965566
Length = 880
Score = 87.0 bits (206), Expect = 1e-17
Identities = 45/129 (34%), Positives = 61/129 (47%)
Frame = +1
Query: 181 DNRKAYEDIVRENAAFEEYYKMQKICPEEQWPVFMQTLKENLPTAFRITGSKGEADALMK 360
+ +++ EN AFE+YYK Q+I PE +W FM L++ LP FRI S +
Sbjct: 47 EGNPSWQPFATENPAFEDYYKAQQIIPEGEWDDFMNMLRKPLPATFRINASCQFYQDICS 106
Query: 361 IVNSDYFSQLLNXXXXXXXXXXXXXXXPVNLPWYPGGFAWQLRLTRMDIRRNEALYRLHN 540
+ +D+ L LPWYPG AW L +RM +RRN+AL H
Sbjct: 107 QLENDFRKSLETEVSDEHEEDAIRP-----LPWYPGNLAWHLNFSRMQLRRNQALEGFHE 161
Query: 541 FLVAETAAG 567
FL E G
Sbjct: 162 FLKRENEVG 170
Score = 64.9 bits (151), Expect = 7e-11
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +2
Query: 530 GFITFLXXXXXXXXXXXXXXXXMIPPVVLDVKPHHKVLDMCAAPGSKTAQLIEFLH--AD 703
GF FL M+PP+ L+V+P H +LDMCAAPGSKT QL+E +H
Sbjct: 158 GFHEFLKRENEVGNITRQEAVSMVPPLFLNVQPDHHILDMCAAPGSKTFQLLEMIHQSTK 217
Query: 704 EDKMPTGFVMANDVN 748
+P V+ANDV+
Sbjct: 218 PGMLPNALVVANDVD 232
>08_02_1046 -
23919990-23920183,23920251-23920479,23920624-23921057,
23921426-23921567,23922163-23922255,23923132-23923245,
23924181-23924266,23924458-23924506,23924717-23924783,
23925550-23925665,23925698-23925821,23926465-23926553,
23926810-23927061
Length = 662
Score = 79.8 bits (188), Expect = 2e-15
Identities = 46/150 (30%), Positives = 68/150 (45%), Gaps = 14/150 (9%)
Frame = +1
Query: 160 PQEKPNGDNRKAYEDIVRENAAFEEYYKMQKICPEEQWPVFMQTLKENLPTAFRITGSKG 339
P G+ ++++ EN AFEEYYK Q+I EE+W F+ L++ LP FRI S
Sbjct: 57 PAAAARGEANRSWQPPPLENPAFEEYYKEQRIVREEEWDDFISVLRKPLPATFRINASSQ 116
Query: 340 EADALMKIVNSDY-------------FSQLLNXXXXXXXXXXXXXXXPVN-LPWYPGGFA 477
+ + +D+ ++ LN + LPWYPG A
Sbjct: 117 FFKDICSKLENDFKRYLESEVATLFIYTLYLNTSSCHSNVSDEYGEDAIRPLPWYPGNLA 176
Query: 478 WQLRLTRMDIRRNEALYRLHNFLVAETAAG 567
W L +R +R+N+AL H FL E+ G
Sbjct: 177 WHLNFSRKQLRKNQALESFHEFLKHESEVG 206
Score = 57.6 bits (133), Expect = 1e-08
Identities = 22/38 (57%), Positives = 31/38 (81%)
Frame = +2
Query: 596 MIPPVVLDVKPHHKVLDMCAAPGSKTAQLIEFLHADED 709
M+PP+ L+++P H VLDMCAAPGSKT QL+E +H ++
Sbjct: 216 MVPPLFLNIQPDHHVLDMCAAPGSKTFQLLEMIHQSKE 253
>02_02_0666 -
12757555-12757688,12757968-12758029,12758156-12758223,
12758359-12758490,12759116-12759351,12759451-12759648,
12760123-12760213,12760566-12760710,12760837-12760955
Length = 394
Score = 36.3 bits (80), Expect = 0.028
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 608 VVLDVKPHHKVLDMCAAPGSKTAQLIEFL 694
+ LDV+P VLD+CAAPG+K L + L
Sbjct: 101 LALDVQPGEHVLDLCAAPGAKLCMLADML 129
>08_02_0423 -
16946435-16946542,16946924-16947045,16947442-16947504,
16949707-16949844,16950062-16950170,16950610-16950934,
16952482-16952645
Length = 342
Score = 35.9 bits (79), Expect = 0.037
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2
Query: 611 VLDVKPHHKVLDMCAAPGSKTAQL 682
VLD +P ++LDMCAAPG KT +
Sbjct: 265 VLDPQPGERILDMCAAPGGKTTAI 288
>05_05_0299 - 23930657-23932627
Length = 656
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 136 DRKEQEKNPQEKPNGDNRKAYEDIVRENAAFEEYYKMQKICP--EEQWPV 279
D K + K Q KPN YE + ++ +Y M+KI P E +W V
Sbjct: 518 DLKTRFKYKQVKPNSFGLSTYEILASDDKDLNQYVSMKKIAPYREAEWKV 567
>02_02_0076 +
6581428-6581695,6582247-6582305,6582481-6582531,
6582766-6582898,6583533-6583618,6583955-6584008,
6584576-6584645,6585198-6585259,6585370-6585457,
6585645-6585728,6585820-6586028
Length = 387
Score = 32.7 bits (71), Expect = 0.34
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 608 VVLDVKPHHKVLDMCAAPGSKTAQLIEFLHAD 703
V L +P KV+D CAAPG+KT L ++ +
Sbjct: 208 VALCPEPGWKVIDACAAPGNKTVHLAALMNGE 239
>08_02_1418 -
26931896-26932339,26932435-26932668,26932805-26933110,
26933462-26933644,26934386-26934493
Length = 424
Score = 31.9 bits (69), Expect = 0.59
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 131 NVTARSKRKIHKRNRTGIIERLMKILFEKMPHSKNTIRCKKSAQKSSGRSSCKLSKRI 304
N R RK + NR G+++ ++IL ++P S+N R K ++ SS + + +
Sbjct: 282 NFRYRYDRKTNPHNR-GLVQNFIEILCSRIPSSRNNFRAKVKEDSATFPSSLGMGRAL 338
>09_03_0009 + 11463049-11463063,11464136-11464492
Length = 123
Score = 31.5 bits (68), Expect = 0.79
Identities = 25/94 (26%), Positives = 44/94 (46%)
Frame = +2
Query: 56 PITNIPSSQLRWVEKIGTSTNSRKGNVTARSKRKIHKRNRTGIIERLMKILFEKMPHSKN 235
P+ + LR K S S G+ AR +R ++ RL++++ +
Sbjct: 25 PLEVVVRGSLRCRSKTSRSCTSTSGSRGARIATFADRRPVI-VVPRLVEVVV------RG 77
Query: 236 TIRCKKSAQKSSGRSSCKLSKRIYLRHSVSQDLR 337
++RC+ +S + C+ S+ IY RH S+DLR
Sbjct: 78 SLRCRSKTSRSHTSTICRESRVIYGRH--SRDLR 109
>05_01_0372 - 2913518-2916562,2916674-2917528
Length = 1299
Score = 31.5 bits (68), Expect = 0.79
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +1
Query: 124 QRKRDRKEQEKNPQEKPNGDNRKAYEDIVRENAAFEEYYKMQKICPEEQWPVFMQTLKE 300
++ D +E ++ P KP ++ A ++NA F+EY K+ ++QW ++ LKE
Sbjct: 936 EQDEDEEEYDQLPPFKPLTKSQLARLTKEQKNAYFDEYDYRVKLLQKKQWKDEIRRLKE 994
>09_04_0515 +
18238434-18238545,18238659-18238709,18238844-18238897,
18239727-18239777,18239845-18239895,18240056-18240210,
18240550-18240663,18240873-18240938,18241478-18241561,
18241640-18241726,18241975-18242066,18242163-18242223,
18242475-18242531,18243129-18243220,18243394-18243584,
18244203-18244321,18244518-18244589,18244699-18244784,
18244866-18244962,18245488-18245622
Length = 608
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 611 VLDVKPHHKVLDMCAAPGSKT 673
V+D +P ++D CAAPG KT
Sbjct: 409 VVDPQPGETIIDCCAAPGGKT 429
>03_06_0146 - 31976538-31978643,31978653-31978751
Length = 734
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 124 QRKRDRKEQEKNPQEKPNGDNRKAYEDIVRENAAFEEYYKMQKICPEEQWPVF 282
+ + D E+ +E+ +G N+ Y+ I E+ EE M++ EE+WP F
Sbjct: 350 EEESDCDEEIDEEEEEEHGGNK--YDAIDNESFGEEESVCMEQSYAEEEWPEF 400
>08_02_0095 -
12285976-12286037,12286111-12287229,12287494-12288604,
12288695-12288757,12288851-12288913,12289268-12289318,
12289538-12289617,12290078-12290164,12290349-12290435,
12290889-12290975,12292106-12292308,12292756-12292922
Length = 1059
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 127 RKRDRKEQEKNPQEKPNGDN 186
RK++RKE +K+ +K NGDN
Sbjct: 879 RKKERKETKKHIMQKENGDN 898
>01_06_0393 +
28968873-28968918,28969048-28969084,28969165-28969384,
28969557-28969715,28969831-28969950,28972154-28972240,
28972329-28972418,28972516-28972602,28972761-28972877,
28972945-28973028,28973585-28975324,28975670-28975816,
28975998-28976431,28976523-28976667
Length = 1170
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +2
Query: 659 PGSKTAQLIEFLHADEDKMPTGFVMANDVNTADATC 766
PG +TA FLH ++D + + N + D C
Sbjct: 249 PGQRTAVFGRFLHPEKDYLSFSLIFKNGQRSLDLVC 284
>06_03_0196 -
17784747-17784833,17786061-17786333,17787982-17788166,
17788267-17788381
Length = 219
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 67 YS*FSIKMGRKNRNVNKFAQRKRDRKEQEKNPQEKPNGDNRKA 195
YS FS+K G+K + + KE E K N D +KA
Sbjct: 170 YSYFSVKEGKKKATNDPLPVSQMPEKETEPLLATKDNSDTKKA 212
>05_06_0088 -
25453249-25453282,25453369-25453461,25454111-25454199,
25454603-25454665,25454935-25455024,25455204-25455264,
25455499-25455593,25455861-25455950,25456136-25456222,
25456992-25457303
Length = 337
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 208 VRENAAFEEYYKMQKICPEEQWPVFMQTLKEN 303
+REN A ++K+ P+E V++ T++ N
Sbjct: 223 LRENVALSSFFKILTTSPDENGEVYVSTVQAN 254
>02_05_0583 +
30128795-30129158,30129342-30129505,30129602-30129665,
30130082-30130215,30130369-30130452,30130580-30130654,
30130734-30130805,30130892-30130965,30131217-30131269,
30131388-30131497,30131824-30131892,30131975-30132049,
30132449-30132508,30132555-30132647,30132718-30132797,
30132877-30132976,30133153-30133590
Length = 702
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 599 IPPVVLDVKPHHKVLDMCAAPGSKTAQLIEFLHADEDKMPTGFVMANDVN 748
+P + L + +++DM AAPG KT + + TG + AN+ N
Sbjct: 327 LPVMALAPQEKERIVDMAAAPGGKTTYIGALM------KNTGIIYANEFN 370
>01_07_0024 -
40559423-40559863,40559959-40560192,40560546-40560842,
40561048-40561230,40561534-40561590,40561851-40561937
Length = 432
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 131 NVTARSKRKIHKRNRTGIIERLMKILFEKMPHSKNTIRCKKSAQKSSG 274
N R ++ + NR G++E + I F +P SKN R + + G
Sbjct: 291 NFRYRYDQRANPYNR-GVMENIKDIFFSAIPASKNNFRARVPVPQEQG 337
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,682,999
Number of Sequences: 37544
Number of extensions: 387974
Number of successful extensions: 1199
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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