Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0475
(627 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15) 33 0.25
SB_27470| Best HMM Match : Baculo_PEP_C (HMM E-Value=2.8) 32 0.33
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_42474| Best HMM Match : Collagen (HMM E-Value=0.14) 31 1.0
SB_1945| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_20712| Best HMM Match : DUF583 (HMM E-Value=4.4) 30 1.3
SB_37798| Best HMM Match : Sec15 (HMM E-Value=1.8) 30 1.3
SB_34181| Best HMM Match : Extensin_2 (HMM E-Value=0.57) 30 1.8
SB_46200| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_42623| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_16708| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_21164| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 29 4.1
SB_31589| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_31092| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_18635| Best HMM Match : 7tm_1 (HMM E-Value=8.54792e-44) 28 5.4
SB_382| Best HMM Match : Extensin_2 (HMM E-Value=0.61) 28 5.4
SB_9722| Best HMM Match : EGF_CA (HMM E-Value=2.4e-06) 28 7.1
SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_48164| Best HMM Match : DUF1168 (HMM E-Value=0.19) 27 9.4
SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54) 27 9.4
SB_15235| Best HMM Match : DUF1421 (HMM E-Value=1.5) 27 9.4
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 35.5 bits (78), Expect = 0.036
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +1
Query: 310 ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRK 489
+++ +LP K + LP S + PT P+ T PS + T TATLPS K
Sbjct: 240 QTTTTLPSTKQPTTTQQTTTTLP--STKQPTTPQLTTTTFPSTKQPTTTQQTTATLPSTK 297
Query: 490 EGA----LPSTCPSRQTRP 534
+ +T P+ T+P
Sbjct: 298 QPTTTQQTTATLPTPSTKP 316
Score = 31.9 bits (69), Expect = 0.44
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Frame = +1
Query: 310 ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRK 489
+++ +LP K + +P S + PT + T LPS + T T TLPS K
Sbjct: 208 QTTTTLPSTKQPTTTQQTTTTIP--STKQPTTTQQTTTTLPSTKQPTTTQQTTTTLPSTK 265
Query: 490 EGALP----STCPSRQTRPRQGICARTLPR*KE 576
+ P +T PS + TLP K+
Sbjct: 266 QPTTPQLTTTTFPSTKQPTTTQQTTATLPSTKQ 298
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +1
Query: 310 ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRK 489
+++ +LP K P P S + PT + T LPS + T TATLP+
Sbjct: 256 QTTTTLPSTKQPTTPQLTTTTFP--STKQPTTTQQTTATLPSTKQPTTTQQTTATLPTPS 313
Query: 490 EGALPSTCPSRQTRP 534
+ +RQ P
Sbjct: 314 TKPTTVSPTTRQPPP 328
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 385 SARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKE 492
S R PT + T LPS + T T T+PS K+
Sbjct: 199 STRQPTTNQQTTTTLPSTKQPTTTQQTTTTIPSTKQ 234
>SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15)
Length = 1605
Score = 32.7 bits (71), Expect = 0.25
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Frame = -3
Query: 619 WVRSGHVHFDWNMNFLFNGVRFWHIYLDGDGSVDWDMYWVRHLLFDWVGLRY--VNWYLD 446
WV GH DW L + V W + L G VDW + HL+ DWVGL + V+W
Sbjct: 794 WVGLGHSVVDWVG--LGHSVVDW-VGL-GHSVVDW--VGLGHLVVDWVGLGHSVVDWV-- 845
Query: 445 NLFNWVRDMFDNGVGLGNVHFHGVGDFL--FYRVGDVLFDGVGNRNFLNDSYG 293
L + V D G+G V + G+G+ + + +G + D VG N + D G
Sbjct: 846 GLGHSVVDYV--GLGHSVVDYVGLGNSVVDWVGLGHSVVDWVGLGNSVLDWVG 896
>SB_27470| Best HMM Match : Baculo_PEP_C (HMM E-Value=2.8)
Length = 627
Score = 32.3 bits (70), Expect = 0.33
Identities = 31/88 (35%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Frame = +1
Query: 322 SLPRRKAHPLPG--RKENPLPRESARSPTLPRCQTC--PLPS*RDCQGTSSRTATLPS-- 483
+LPR + LP + + LPR R TLPR TC LP +R TLP
Sbjct: 266 TLPRTRLDTLPRVVTRLDTLPRVVTRLDTLPRVVTCLDTLPR------VGTRLDTLPRIV 319
Query: 484 RKEGALPSTCPSRQTRPRQGICARTLPR 567
+ LP T PR G TLPR
Sbjct: 320 TRLDTLPRVVTRLDTLPRVGTRLDTLPR 347
Score = 29.1 bits (62), Expect = 3.1
Identities = 26/73 (35%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Frame = +1
Query: 355 GRKENPLPRESARSPTLPRCQTCP--LPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQT 528
G + + LPR R TLPR T P LP C T R T + LP T
Sbjct: 171 GTRLDTLPRVVTRLDTLPRVVTRPDTLPRVVTCLDTLPRVGT----RLDTLPRVVTRLDT 226
Query: 529 RPRQGICARTLPR 567
PR TLPR
Sbjct: 227 LPRVVTRLDTLPR 239
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/74 (29%), Positives = 27/74 (36%)
Frame = +1
Query: 313 SSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKE 492
S S P + HP P NP P S P P PS S ++ PS +
Sbjct: 468 SPISNPSPRPHPSPHPSSNPSPNPSPN----PSSDPSPNPSSNPSSDPSPNPSSNPSSEP 523
Query: 493 GALPSTCPSRQTRP 534
P + PS T P
Sbjct: 524 SPNPISNPSISTSP 537
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/63 (25%), Positives = 23/63 (36%)
Frame = +1
Query: 346 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQ 525
P P NP S + P T P+ + S ++ PS + PS+ PS
Sbjct: 511 PSPNPSSNPSSEPSPNPISNPSISTSPISNPHPSSNPSPHPSSNPSSEPSPNPSSNPSSD 570
Query: 526 TRP 534
P
Sbjct: 571 PSP 573
>SB_42474| Best HMM Match : Collagen (HMM E-Value=0.14)
Length = 221
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -2
Query: 434 LGKGHV*QRGRVGERALSRGRGFSFLPGRGCAFRRGR 324
L KG V +GR+G R RGRG + PGRG RGR
Sbjct: 83 LNKGSV--QGRLGARG--RGRGMARGPGRGMVGARGR 115
>SB_1945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -3
Query: 418 FDNGVGLGNVHFHGVGDFLFYRVGDVLFDGVGN 320
FD+G+G+G H H YRV DV +DG G+
Sbjct: 793 FDDGIGVGIAHNH-------YRVSDVDYDGAGS 818
>SB_20712| Best HMM Match : DUF583 (HMM E-Value=4.4)
Length = 369
Score = 30.3 bits (65), Expect = 1.3
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = -2
Query: 566 RGKVLAHIP*RG----RVCRLGHVLGKAPSFR--LGRVAVRELVP*QSL*LGKGH--V*Q 411
RGKV +P RG RV G V + P+ GRV +E V + GK + V
Sbjct: 101 RGKVYGRVPARGKVYGRVPTYGKVYERVPARGKVYGRVPTQEKVYERVPARGKVNWRVPV 160
Query: 410 RGRVGERALSRGRGFSFLPGRGCAFRR 330
RG+V R +RG+ + +P RG + R
Sbjct: 161 RGKVYWRVPARGKVYGRVPARGKVYGR 187
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -2
Query: 503 GKAPSFRL-GRVAVRELVP*QSL*LGK-GHV*QRGRVGERALSRGRGFSFLPGRGCAFRR 330
G+ FR+ G V E V + GK GHV RG+V R +RG+ + +P G + R
Sbjct: 68 GRVTPFRVYGHVPTHERVSRRVHTHGKYGHVPARGKVYGRVPARGKVYGRVPTYGKVYER 127
>SB_37798| Best HMM Match : Sec15 (HMM E-Value=1.8)
Length = 1007
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/67 (22%), Positives = 27/67 (40%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V V
Sbjct: 197 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYSWVSVATYSLVSV 256
Query: 325 GNRNFLN 305
N+++
Sbjct: 257 ATYNWVS 263
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 5 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 64
Query: 325 GNRNFLN 305
N+++
Sbjct: 65 ATYNWVS 71
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 13 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 72
Query: 325 GNRNFLN 305
N+++
Sbjct: 73 ATYNWVS 79
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 21 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 80
Query: 325 GNRNFLN 305
N+++
Sbjct: 81 ATYNWVS 87
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 29 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 88
Query: 325 GNRNFLN 305
N+++
Sbjct: 89 ATYNWVS 95
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 37 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 96
Query: 325 GNRNFLN 305
N+++
Sbjct: 97 ATYNWVS 103
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 45 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 104
Query: 325 GNRNFLN 305
N+++
Sbjct: 105 ATYNWVS 111
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 53 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 112
Query: 325 GNRNFLN 305
N+++
Sbjct: 113 ATYNWVS 119
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 61 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 120
Query: 325 GNRNFLN 305
N+++
Sbjct: 121 ATYNWVS 127
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 69 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 128
Query: 325 GNRNFLN 305
N+++
Sbjct: 129 ATYNWVS 135
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 77 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 136
Query: 325 GNRNFLN 305
N+++
Sbjct: 137 ATYNWVS 143
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 85 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 144
Query: 325 GNRNFLN 305
N+++
Sbjct: 145 ATYNWVS 151
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 93 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 152
Query: 325 GNRNFLN 305
N+++
Sbjct: 153 ATYNWVS 159
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 101 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 160
Query: 325 GNRNFLN 305
N+++
Sbjct: 161 ATYNWVS 167
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 109 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 168
Query: 325 GNRNFLN 305
N+++
Sbjct: 169 ATYNWVS 175
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 117 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 176
Query: 325 GNRNFLN 305
N+++
Sbjct: 177 ATYNWVS 183
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 125 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 184
Query: 325 GNRNFLN 305
N+++
Sbjct: 185 ATYNWVS 191
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 133 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 192
Query: 325 GNRNFLN 305
N+++
Sbjct: 193 ATYNWVS 199
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 141 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 200
Query: 325 GNRNFLN 305
N+++
Sbjct: 201 ATYNWVS 207
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 149 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 208
Query: 325 GNRNFLN 305
N+++
Sbjct: 209 ATYNWVS 215
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 157 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 216
Query: 325 GNRNFLN 305
N+++
Sbjct: 217 ATYNWVS 223
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 165 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 224
Query: 325 GNRNFLN 305
N+++
Sbjct: 225 ATYNWVS 231
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 326
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 173 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 232
Query: 325 GNRNFLN 305
N+++
Sbjct: 233 ATYNWVS 239
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGL 398
WV + WV + +W +NWV DN V +
Sbjct: 285 WVSVATYSWVSVATYSWVSVATYNWVSVATDNWVSV 320
>SB_34181| Best HMM Match : Extensin_2 (HMM E-Value=0.57)
Length = 1121
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +1
Query: 346 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKE 492
P P R NP P +A P+ PR + P P +G S +A PS E
Sbjct: 846 PTPLRPTNPTPAHAASKPSNPR-PSNPTPKHAMGEGVSDNSAEPPSPGE 893
>SB_46200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 316 SCSLPR--RKAHPLPGRKENPLPRESARSPTLPRCQT 420
+C LPR R + P PGR NP R + +P C T
Sbjct: 4 TCYLPREIRSSSPSPGRSANPHCRYNESNPRTQGCAT 40
>SB_42623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +1
Query: 325 LPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALP 504
+PR +P P +NP PR + ++P +PR P PS S + PS +G+ P
Sbjct: 52 IPRVTKNPFPRVTKNPFPRVT-KNP-IPRVTKEPHPSCDQRSHPSCDQGSHPSCDQGSHP 109
Query: 505 S 507
S
Sbjct: 110 S 110
>SB_16708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 516
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1
Query: 328 PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPS 507
P + HP PG P+ + +P +PR T PLP ++ SRT+T PS + PS
Sbjct: 141 PSFQDHPGPGVMPQMPPQMAPGTPLMPRIPTPPLP--QNMGLGLSRTST-PSPELRVSPS 197
Query: 508 TCPSRQTRPRQ 540
P+ +T Q
Sbjct: 198 --PTLKTESTQ 206
>SB_21164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = -3
Query: 505 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRV 350
W R + W + WY + W R M D G+ ++G +YRV
Sbjct: 77 WYRVTIDQWYRVTIDQWYRVTIDQWYRVMIDQWYGVTIDQWYGATIDQWYRV 128
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 346 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALP 504
PLP + PLP + + P P PLP + G+ + S K+ LP
Sbjct: 450 PLPSDEPPPLPPDEEKPPPPPAPALPPLPLPPELPGSPGDSPPATSPKQPPLP 502
>SB_31589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 409 RCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQ-TRPRQG 543
RC T + + + TS TA R+ + PST PSRQ + PR G
Sbjct: 9 RCDTGRETAPTESRATSLSTAGFCGRRSRSPPSTRPSRQGSAPRTG 54
>SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +1
Query: 343 HPLPGRKE-NPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPST 510
HP P +++ +P P + R P + Q P PS + Q S+ P + P T
Sbjct: 202 HPRPSQQQRHPRPSQQQRHPRPSQQQRYPRPSQQQRQPRPSQQQRYPRHNQQQTPET 258
>SB_31092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +1
Query: 349 LPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQT 528
LP R N SP T PLP + TS+ +P+ +G + +T PS+Q+
Sbjct: 298 LPPRSSNEASETVIDSPL-----TDPLPDEEGGKVTSNEEEVVPAVSQGVVEATSPSQQS 352
Query: 529 RPRQGIC 549
G C
Sbjct: 353 LHDFGEC 359
>SB_18635| Best HMM Match : 7tm_1 (HMM E-Value=8.54792e-44)
Length = 350
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 462 TYRNPTQSKRRCLTQYMSQSTDPSPSRYMCQNLTPLKRKFMFQSKCTC 605
T R +QS+R C + S S P+P+R L P+ + + + K TC
Sbjct: 307 TIRRQSQSRRNCYSVISSNSPSPAPNR----RLLPINEEALIE-KETC 349
>SB_382| Best HMM Match : Extensin_2 (HMM E-Value=0.61)
Length = 314
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +1
Query: 280 GSPQNRNCR*ESSCSLPRRKAHPLPGRKENPL-PRESARSPTLPRCQTCP 426
G P N E + P+PGR +P+ PR S + PT T P
Sbjct: 24 GPPSPLNTEMEPPIDVQFTSPQPMPGRNSSPIVPRASPQPPTARPYGTSP 73
>SB_9722| Best HMM Match : EGF_CA (HMM E-Value=2.4e-06)
Length = 673
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 396 PNPTPLSNMSLTQLKRLSRYQF 461
PNP P +NM+ +LK RY++
Sbjct: 524 PNPCPSTNMTCVELKGTPRYRY 545
>SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 439 RDCQGTSSRTATLPSRKEGALPSTCPSRQT-RP 534
R CQ T S P + A+P CP+ QT RP
Sbjct: 169 RSCQNTISSIPLKPGLEGYAMPRKCPTDQTGRP 201
>SB_48164| Best HMM Match : DUF1168 (HMM E-Value=0.19)
Length = 1883
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Frame = +1
Query: 280 GSPQNRNCR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTS 459
G R R S +PRR ++ P PR++A S +LP P+ R G
Sbjct: 1392 GGHMLRTVRRPLSAPMPRRSTSISDLARDLPTPRQAAHSASLPDLTMVQTPA-RFSNGEQ 1450
Query: 460 SRTATL---PSRKEGALPSTCPSRQTRPRQGICAR 555
++ + L + + AL ++ ++ P+ + ++
Sbjct: 1451 AKPSKLRLDAPKPQSALVTSTKTKAVEPQSVMASK 1485
>SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)
Length = 240
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 352 PGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQTR 531
P K P+E+ ++ + QT P S + + TS +T+ SRK S S +T
Sbjct: 42 PEDKLEDKPKENQQNKPEDKQQTSPKTSRKTSKKTSQKTSLNASRKTSRRTSLKRSLKTS 101
Query: 532 PR 537
P+
Sbjct: 102 PK 103
>SB_15235| Best HMM Match : DUF1421 (HMM E-Value=1.5)
Length = 754
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Frame = +1
Query: 280 GSPQNRNCR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTS 459
G R R S +PRR ++ P PR++A S +LP P+ R G
Sbjct: 263 GGHMLRTVRRPLSAPMPRRSTSISDLARDLPTPRQAAHSASLPDLTMVQTPA-RFSNGEQ 321
Query: 460 SRTATL---PSRKEGALPSTCPSRQTRPRQGICAR 555
++ + L + + AL ++ ++ P+ + ++
Sbjct: 322 AKPSKLRLDAPKPQSALVTSTKTKAVEPQSVMASK 356
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,128,503
Number of Sequences: 59808
Number of extensions: 254535
Number of successful extensions: 968
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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