Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0473
(698 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 213 9e-56
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 213 9e-56
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 213 1e-55
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 211 5e-55
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 210 8e-55
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 206 1e-53
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 129 5e-35
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 105 3e-23
08_01_0533 + 4625376-4625709,4625799-4625966,4627428-4627689,462... 29 2.7
04_04_1588 - 34633057-34633824 28 6.2
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 28 8.2
06_03_1237 + 28602250-28604196 28 8.2
02_02_0106 + 6814391-6817007,6817086-6817462 28 8.2
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 213 bits (521), Expect = 9e-56
Identities = 100/139 (71%), Positives = 116/139 (83%)
Frame = +2
Query: 62 LLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAK 241
LL+ HL+P ++ PESKVFYLKMKGDYYRYLAE TG R E++ AY+ A +I+ A+
Sbjct: 110 LLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAE 169
Query: 242 MQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQ 421
+ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL+E+SYKDSTLIMQ
Sbjct: 170 LPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQ 229
Query: 422 LLRDNLTLWTSDTQGDGDE 478
LLRDNLTLWTSD D E
Sbjct: 230 LLRDNLTLWTSDISEDTAE 248
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 213 bits (521), Expect = 9e-56
Identities = 99/132 (75%), Positives = 114/132 (86%)
Frame = +2
Query: 62 LLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAK 241
LLD HL+P ++ PESKVFYLKMKGDYYRYLAE TG R E++ AY+ A +I+ A+
Sbjct: 328 LLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAE 387
Query: 242 MQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQ 421
+ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL+E+SYKDSTLIMQ
Sbjct: 388 LPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQ 447
Query: 422 LLRDNLTLWTSD 457
LLRDNLTLWTSD
Sbjct: 448 LLRDNLTLWTSD 459
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 213 bits (520), Expect = 1e-55
Identities = 103/143 (72%), Positives = 116/143 (81%), Gaps = 1/143 (0%)
Frame = +2
Query: 62 LLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAK 241
LLD HL+P ++ ESKVFYLKMKGDY+RYLAE TG R E + AY+ A +I+ A
Sbjct: 104 LLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALAD 163
Query: 242 MQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQ 421
+ PTHPIRLGLALNFSVFYYEILNSPDKAC LAKQAFD+AI+ELDTL E+SYKDSTLIMQ
Sbjct: 164 LAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQ 223
Query: 422 LLRDNLTLWTSD-TQGDGDEPAE 487
LLRDNLTLWTSD T+ GDE E
Sbjct: 224 LLRDNLTLWTSDLTEDGGDEVKE 246
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 211 bits (515), Expect = 5e-55
Identities = 98/139 (70%), Positives = 113/139 (81%)
Frame = +2
Query: 62 LLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAK 241
LLD HL+P A ESKVFYLKMKGDY+RYLAE +G+ R E + AY+ A +I+ A
Sbjct: 87 LLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIALAD 146
Query: 242 MQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQ 421
+ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELD+L E+SYKDSTLIMQ
Sbjct: 147 LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQ 206
Query: 422 LLRDNLTLWTSDTQGDGDE 478
LLRDNLTLWTSD DG +
Sbjct: 207 LLRDNLTLWTSDANDDGGD 225
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 210 bits (513), Expect = 8e-55
Identities = 100/139 (71%), Positives = 113/139 (81%)
Frame = +2
Query: 62 LLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAK 241
LLD HL+P A+ ESKVFYLKMKGDY+RYLAE +G R E++ AY+ A +I+ A
Sbjct: 109 LLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALAD 168
Query: 242 MQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQ 421
+ THPIRLGLALNFSVFYYEILNSPD+AC LAKQAFDDAIAELDTL E+SYKDSTLIMQ
Sbjct: 169 LPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQ 228
Query: 422 LLRDNLTLWTSDTQGDGDE 478
LLRDNLTLWTSD DG +
Sbjct: 229 LLRDNLTLWTSDNAEDGGD 247
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 206 bits (504), Expect = 1e-53
Identities = 97/139 (69%), Positives = 114/139 (82%)
Frame = +2
Query: 62 LLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAK 241
LLD+ L+P A+ ++KVFYLKMKGDY+RYLAE TG R + + AYQ A +I+ +
Sbjct: 114 LLDERLVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKE 173
Query: 242 MQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQ 421
+ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL E+SYKDSTLIMQ
Sbjct: 174 LSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLIMQ 233
Query: 422 LLRDNLTLWTSDTQGDGDE 478
LLRDNLTLWTSD Q DG +
Sbjct: 234 LLRDNLTLWTSDMQDDGGD 252
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 129 bits (312), Expect(2) = 5e-35
Identities = 61/93 (65%), Positives = 73/93 (78%)
Frame = +2
Query: 218 AFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSY 397
A + ++ + PT PIRLGLALN SVFY EI+NSPDKACQLAK AFD+A+AEL +L+E++Y
Sbjct: 146 ASKTAQTDLTPTDPIRLGLALNISVFYCEIMNSPDKACQLAKNAFDEAVAELPSLSEENY 205
Query: 398 KDSTLIMQLLRDNLTLWTSDTQGDGDEPAEGGD 496
KDSTLIMQLLRDNL LW SD D D+ E D
Sbjct: 206 KDSTLIMQLLRDNLALWNSDMADDADDIRERTD 238
Score = 36.3 bits (80), Expect(2) = 5e-35
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +2
Query: 128 KGDYYRYLAEVATGETRHSVVEDSQKAYQ 214
KGDYYRYLAE TG + V E S AY+
Sbjct: 85 KGDYYRYLAEFKTGTEKIEVSELSLNAYE 113
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 105 bits (252), Expect = 3e-23
Identities = 58/131 (44%), Positives = 84/131 (64%)
Frame = +2
Query: 74 HLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPT 253
H +P A++ E+ VF+ KMKGDYYRYLAE +TG + + + S AYQ A+ ++
Sbjct: 105 HCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQ-AWPCAQL----- 158
Query: 254 HPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRD 433
FS+ EI+NSP++A Q+AKQA D+A AE+++ + YKDS L+MQLL++
Sbjct: 159 ----------FSLL--EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKE 206
Query: 434 NLTLWTSDTQG 466
NL LWTS+ G
Sbjct: 207 NLALWTSELTG 217
>08_01_0533 +
4625376-4625709,4625799-4625966,4627428-4627689,
4627787-4627934,4628453-4628496,4628812-4628859,
4629245-4630509,4630741-4630839,4630916-4631097,
4631186-4631246,4631488-4631725,4631818-4631971,
4632042-4632335
Length = 1098
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +2
Query: 287 SVFYYEILNSPDKACQLAKQAFDDAIAEL-DTLNEDSYKDSTLIMQLLRD-NLTLWTSDT 460
S Y + PD + K++FD+ + E + +Y S + ++ D LWT +
Sbjct: 676 SFLTYPSMKVPDNFIYIHKRSFDECMVECRSNCSCVAYAYSNISSGIIDDTRCLLWTGEL 735
Query: 461 QGDGDEPAEGGDN*YLAA 514
D ++ +GG+N Y+ A
Sbjct: 736 I-DMEKVTQGGENLYIRA 752
>04_04_1588 - 34633057-34633824
Length = 255
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 535 KCVCWGECGEILVVAALGRLVAIALSV*RPK 443
+CVCW +++ ALG I +V +PK
Sbjct: 68 RCVCWTLLAVLVLAVALGATAGILYAVFKPK 98
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 41 LFFAFQGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAE-VATG 169
+FFA + L D+ +I + + E + F LK DY++YL+E ++TG
Sbjct: 1582 VFFA-KSLDDRFIIKQVTKTELESF-LKFGLDYFKYLSESISTG 1623
>06_03_1237 + 28602250-28604196
Length = 648
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +2
Query: 59 GLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKA 238
GL+D + + SKVFY + + Y Y + +A G H ++ +++ +++A
Sbjct: 314 GLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIA-GLASHGRASEAIALFKEM--VNRA 370
Query: 239 KMQPTHPIRLGL 274
++P H +G+
Sbjct: 371 NVEPNHVTFIGV 382
>02_02_0106 + 6814391-6817007,6817086-6817462
Length = 997
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 547 CL*ENE*HSRTSSGAVSSPKPTRAVACKNVKSRSQRTFPFRLKL-NVVSSL 696
CL +N H S +SSP PT C N+K F KL N ++SL
Sbjct: 93 CLLKNLTHLDVSYNNISSPFPTMLYNCSNLKYLDLSNNAFAGKLPNDINSL 143
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,721,108
Number of Sequences: 37544
Number of extensions: 357724
Number of successful extensions: 964
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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