Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0471
(678 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g60900.1 68416.m06813 fasciclin-like arabinogalactan-protein ... 30 1.2
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 30 1.2
At3g50110.1 68416.m05478 phosphatase-related similar to PTEN1 GI... 29 2.1
At3g19070.1 68416.m02422 cell wall protein-related similar to ve... 29 2.1
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 29 2.8
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 29 2.8
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 29 3.7
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 29 3.7
At2g19970.1 68415.m02335 pathogenesis-related protein, putative ... 28 4.9
At5g40560.1 68418.m04922 DegP protease, putative contains simila... 28 6.5
At5g07570.1 68418.m00867 glycine/proline-rich protein contains s... 28 6.5
At4g24100.1 68417.m03460 protein kinase family protein contains ... 28 6.5
At2g39260.1 68415.m04821 MIF4G domain-containing protein similar... 28 6.5
At1g77970.1 68414.m09086 hydroxyproline-rich glycoprotein family... 28 6.5
At5g18410.2 68418.m02167 expressed protein similar to p53 induci... 27 8.6
At5g18410.1 68418.m02166 expressed protein similar to p53 induci... 27 8.6
At3g44340.1 68416.m04764 sec23/sec24 transport family protein co... 27 8.6
At1g02290.1 68414.m00171 expressed protein 27 8.6
>At3g60900.1 68416.m06813 fasciclin-like arabinogalactan-protein
(FLA10)
Length = 422
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 446 SKSVSRATEQFPEPKSGPVARPEPVWS-EPT*LCPRAGPISESSP 577
S S + A E P P P PV + PT P A P+ ESSP
Sbjct: 336 SSSPAPAPEPVSAPTPTPAKSPSPVEAPSPTAASPPAPPVDESSP 380
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 163 RKRKCKEISSTQHGLHPPTKPTRVSRNRSSKAKISITIMLIILLCPLERTQLQLVQQFQT 342
R R C +I G+ P +KPTR++ + S K T L L P + +L +
Sbjct: 46 RIRLCHKIQVAFGGVEPASKPTRIADHNSEK-----TAPLKALALPGPKGSKELRKSATE 100
Query: 343 RAAMVG--LKPKD 375
+A +VG L P+D
Sbjct: 101 KALVVGPTLPPRD 113
>At3g50110.1 68416.m05478 phosphatase-related similar to PTEN1
GI:5566292 from [Drosophila melanogaster]; contains
prosite evidence: PS00383: Tyrosine specific protein
phosphatases active site
Length = 632
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 97 SVGSLTWSKATKTSQRKPIKLNRKRKCKEISSTQHGLHPPTKPT-RVSRNRSSKAKI 264
S G +W+K+ K Q+ P + + +++ GLH PTK + V +RSS ++
Sbjct: 98 SSGLSSWAKSFKFQQQDPNRTDSGMSAFTRFTSELGLHLPTKGSEEVGDSRSSNTQV 154
>At3g19070.1 68416.m02422 cell wall protein-related similar to
vegetative cell wall protein gp1 [Chlamydomonas
reinhardtii] gi|12018147|gb|AAG45420;
Length = 346
Score = 29.5 bits (63), Expect = 2.1
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Frame = +2
Query: 389 RPTIRE---SIPSAEPKLPRSGSKSVSRATEQFPEPKS---GPVARP--EPVWSEPT*LC 544
RP++RE S PS+ + P S S +R + FP P S P P P EPT +
Sbjct: 187 RPSLREFFPSSPSSSIQPPESSSSKRARLSNIFPSPLSSSPSPFVNPFLRPQAQEPT-IP 245
Query: 545 PRAGPISESSP 577
PI + SP
Sbjct: 246 NFINPIPQISP 256
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +2
Query: 326 SNNSKPGQLWWVSNPRTVSKLRPTIRESIPSAEPKLP-RS--GSKSVSRATEQFPEPKSG 496
SN S G+ N TV+K++ E P P+ P RS G KS + + + P P G
Sbjct: 621 SNESNEGKA--SENAATVTKMKLVDIEKRPPRVPRPPPRSAGGGKSTNLPSARPPLPGGG 678
Query: 497 PVARPEPVWSEP 532
P P P P
Sbjct: 679 PPPPPPPPGGGP 690
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 29.1 bits (62), Expect = 2.8
Identities = 23/72 (31%), Positives = 28/72 (38%)
Frame = +2
Query: 362 SNPRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*L 541
S P VS PT S+PS P + SV + P P + V P V PT
Sbjct: 176 SPPPPVSPPPPTPTPSVPSPPDVTPTPPTPSVPSPPDVTPTPPTPSVPSPPDV--TPTPP 233
Query: 542 CPRAGPISESSP 577
P + P SP
Sbjct: 234 TPPSVPTPSGSP 245
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Frame = +2
Query: 359 VSNPRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVAR---PEPVWSE 529
V++P T PT S P PK P + +E P P P + P P+ S
Sbjct: 48 VTSPTTAPAKTPTASASSPVESPKSP-------APVSESSPPPTPVPESSPPVPAPMVSS 100
Query: 530 PT*LCPRAGPISESSP 577
P P P+++S P
Sbjct: 101 PVSSPPVPAPVADSPP 116
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = +2
Query: 314 SYS*SNNSKPGQLWWVSNPRTVSKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKS 493
S+S S P L SN ++ L I ++ P P P S+S+ Q P P+
Sbjct: 540 SFSPSQPPPPPPLPSFSNRDPLTTLHQPINKTPPPPPPPPPPLPSRSIPPPLAQPPPPRP 599
Query: 494 GPVARPEP 517
P P P
Sbjct: 600 PPPPPPPP 607
>At2g19970.1 68415.m02335 pathogenesis-related protein, putative
similar to pathogenesis-related protein 1 {Arabidopsis
thaliana} GI:166805; contains Pfam profile PF00188:
SCP-like extracellular protein
Length = 177
Score = 28.3 bits (60), Expect = 4.9
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 10/146 (6%)
Frame = +1
Query: 199 HGLHPPTKPTRVSRNRSSKAKISITIMLIILLCPLE--RTQLQLVQQFQTRAAMVGLKPK 372
+GL P +P + + R + K+ I + + PL+ +T Q+F R A G+
Sbjct: 22 YGL-PRVRPIKDVQPRKT-LKVHNQIRAAVGVAPLKWNKTVAAYAQKFANRQAKAGVCDY 79
Query: 373 DSFKTSPNNQGIN--------SKRRTKITTVRLKISFKGNRTISRTKIRSSCKARTSME* 528
S + S G N + + + ++ K N + K + C T M
Sbjct: 80 SSMRHSDGPYGENIAAGWVQPKDQMSGPIAAKYWLTEKPNYDHATNKCKDVCGHYTQMV- 138
Query: 529 TNLTMSKGRANFRIKPNMLVIIKINY 606
N ++S G +FR N L+ I NY
Sbjct: 139 ANQSLSLGCGSFRCHENELIYIVCNY 164
>At5g40560.1 68418.m04922 DegP protease, putative contains
similarity to DegP2 protease GI:13172275 from
[Arabidopsis thaliana]
Length = 410
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -1
Query: 492 DFGSGNCSV-ALETDFEPDRGNFGSALGIDSLIVGRSFETVLGFETHHSC 346
D+ G ++ A++TD + GN G + I + +VG +F+T LG + C
Sbjct: 94 DYAHGAINLPAIQTDAAMNPGNSGGPVCIGNKVVGVAFQT-LGHSNNIGC 142
>At5g07570.1 68418.m00867 glycine/proline-rich protein contains
similarity to flagelliform silk protein [Nephila
clavipes] gi|7106224|gb|AAF36090
Length = 1504
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Frame = -3
Query: 559 WPCPWT*LGWFTPYWF--WPCNWT*FWFWKLFCC 464
W W G +WF W C W FWF F C
Sbjct: 23 WFSRWFCCGLCGRFWFRCWFCCWFQFWFRCRFYC 56
>At4g24100.1 68417.m03460 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 709
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +2
Query: 380 SKLRPTIRESIP---SAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSEPT*LCPR 550
+K++P R+S ++ L S S+ EP++ P R P +S P L R
Sbjct: 450 AKVKPLRRQSQSGPLTSRTVLSHSASEKSHIFERSESEPQTAPTVRRAPSFSGPLNLSTR 509
Query: 551 AGPISESSPI 580
A S S+PI
Sbjct: 510 ASSNSLSAPI 519
>At2g39260.1 68415.m04821 MIF4G domain-containing protein similar to
hUPF2 [Homo sapiens] GI:12232320; contains Pfam profile
PF02854: MIF4G domain
Length = 1186
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/45 (22%), Positives = 21/45 (46%)
Frame = +2
Query: 395 TIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSGPVARPEPVWSE 529
++ E++ P +P G+ ++ E P + PEP+W +
Sbjct: 304 SLAEALDMQPPVMPEDGTTRLTAGDEASPSGTVKDTSVPEPIWDD 348
>At1g77970.1 68414.m09086 hydroxyproline-rich glycoprotein family
protein
Length = 76
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 404 ESIPSAEPK-LPRSGSKSVSRATEQFPEPKSGPVARPEP 517
E P +EP+ P S KS S T PEP P+ P P
Sbjct: 23 EPSPESEPEPAPTSKPKSTSTPTP-IPEPAPTPIPEPAP 60
>At5g18410.2 68418.m02167 expressed protein similar to p53 inducible
protein [Homo sapiens] GI:5616320
Length = 1017
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 380 SKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSG 496
SK+ PT + S+PSA+P G++ ++ A + F SG
Sbjct: 865 SKVPPTQKPSVPSAKPSF-YCGTQDLNAAHQSFARLHSG 902
>At5g18410.1 68418.m02166 expressed protein similar to p53 inducible
protein [Homo sapiens] GI:5616320
Length = 1234
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 380 SKLRPTIRESIPSAEPKLPRSGSKSVSRATEQFPEPKSG 496
SK+ PT + S+PSA+P G++ ++ A + F SG
Sbjct: 831 SKVPPTQKPSVPSAKPSF-YCGTQDLNAAHQSFARLHSG 868
>At3g44340.1 68416.m04764 sec23/sec24 transport family protein
contains Pfam domains PF04811: Sec23/Sec24 trunk domain,
PF04815: Sec23/Sec24 helical domain and PF04810:
Sec23/Sec24 zinc finger
Length = 1096
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 491 SGPVARPEPVWSEPT*LCPRAGPISESSPI 580
SGP+ P P + +P P AGP + +SP+
Sbjct: 242 SGPMMAPPPPYGQP----PNAGPFTGNSPL 267
>At1g02290.1 68414.m00171 expressed protein
Length = 443
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +1
Query: 109 LTWSKATKTSQRKPIKLNRKRKCKEISSTQHGLHPPTKPTRVSRNRS 249
L WS T+T K + LNR KE+ S P V RNRS
Sbjct: 167 LIWSGRTQTGNLKLLDLNRV-PSKEMDSATCRFKTPNVVKPVERNRS 212
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,166,418
Number of Sequences: 28952
Number of extensions: 273402
Number of successful extensions: 1004
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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