Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0470
         (580 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    49   7e-05
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    39   0.098
UniRef50_P17061 Cluster: Hydroxyneurosporene methyltransferase; ...    35   1.2  
UniRef50_A2Q0K5 Cluster: Repeat element protein-d4.1; n=1; Hypos...    33   6.4  
UniRef50_Q8SV02 Cluster: Putative uncharacterized protein ECU07_...    33   6.4  
UniRef50_A6N5I9 Cluster: Putative uncharacterized protein; n=2; ...    32   8.5  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 49.2 bits (112), Expect = 7e-05
 Identities = 20/22 (90%), Positives = 20/22 (90%)
 Frame = +1

Query: 301 FLFLRWVDELAAHLVLSGYWSP 366
           FL LRWVDEL AHLVLSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 38.7 bits (86), Expect = 0.098
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +2

Query: 491 AGWWYLPARTQKRSYHQ 541
           A WWYLPART KRSYH+
Sbjct: 569 AEWWYLPARTHKRSYHR 585


>UniRef50_P17061 Cluster: Hydroxyneurosporene methyltransferase;
           n=7; Rhodobacteraceae|Rep: Hydroxyneurosporene
           methyltransferase - Rhodobacter capsulatus
           (Rhodopseudomonas capsulata)
          Length = 393

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +3

Query: 264 RPQRECSHYLFIFFIS*MGGRARSPPGAKWLLEPIDIYDVTAPSTLR 404
           +P R C  Y   + ++   GR RSP   K +LE      V+ P TLR
Sbjct: 335 KPDRACDVYFAFYTMAMSSGRTRSPEEIKQMLEKAGFTKVSKPRTLR 381


>UniRef50_A2Q0K5 Cluster: Repeat element protein-d4.1; n=1;
           Hyposoter fugitivus ichnovirus|Rep: Repeat element
           protein-d4.1 - Hyposoter fugitivus ichnovirus
          Length = 255

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
 Frame = -2

Query: 276 HAAAVENFRTSQLSIFFN*NPLHLLLDCILKNINTI----HTYDLPNINQFKQIPS*QYN 109
           H A +      QLSI FN NP     +CIL N+ T+        LP +N+F  +   +  
Sbjct: 105 HIAEIPFINGKQLSIEFNYNPWRKNQECILINVETLLPIFGRIMLPVVNKFISVSQIENY 164

Query: 108 VHVFKH-S*CNNY 73
           V +  H + C++Y
Sbjct: 165 VKMHVHLNMCSDY 177


>UniRef50_Q8SV02 Cluster: Putative uncharacterized protein
           ECU07_0900; n=1; Encephalitozoon cuniculi|Rep: Putative
           uncharacterized protein ECU07_0900 - Encephalitozoon
           cuniculi
          Length = 372

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +3

Query: 453 SNRNALLLHGRNRQGGGTYPRGL 521
           + RNALL+HG N  G  TY RGL
Sbjct: 112 TKRNALLVHGFNGSGNSTYMRGL 134


>UniRef50_A6N5I9 Cluster: Putative uncharacterized protein; n=2;
           Pseudomonas aeruginosa|Rep: Putative uncharacterized
           protein - Pseudomonas aeruginosa
          Length = 250

 Score = 32.3 bits (70), Expect = 8.5
 Identities = 21/66 (31%), Positives = 33/66 (50%)
 Frame = +2

Query: 371 HLRRNCAIHLEI*ALRFQV*LQRLPHPFKPKRITASRQKSAGWWYLPARTQKRSYHQQTS 550
           H + N A +     LR QV LQ LP    P+R+   R+ +AGW     +T     + +T 
Sbjct: 151 HYQVNDAFYRLYGQLRQQVLLQGLPVQVHPERVQLGREDTAGWKMDTYQTTLNWLNLKTQ 210

Query: 551 *DLSLS 568
            ++SL+
Sbjct: 211 EEISLN 216


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,963,152
Number of Sequences: 1657284
Number of extensions: 11437999
Number of successful extensions: 23427
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23419
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)